RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 NDUFAF1Q9Y375 327 aa10.16□□□□□ -0.78
TFF3-202ENST00000398431 NPTNQ9Y639 398 aa10.16□□□□□ -0.78
TFF3-202ENST00000398431 LOC100653049A0A140TA62 436 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 ANGPT2O15123 496 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 KRT34O76011 436 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 IGF2P01344 180 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 SCG5P05408 212 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 SBK2P0C263 348 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 TNFRSF1BP20333 461 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 FUT4P22083 530 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 PRTN3P24158 256 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 LAP3P28838 519 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 LIPAP38571 399 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 GDI2P50395 445 aaKnown RBP10.15□□□□□ -0.78
TFF3-202ENST00000398431 PPP1CBP62140 327 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 ERVK-25P63136 954 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 SLC3A1Q07837 685 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 FOXL1Q12952 345 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 PSG7Q13046 419 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 CDK5R2Q13319 367 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 PIN1Q13526 163 aaPredicted RBP10.15□□□□□ -0.78
TFF3-202ENST00000398431 CYLC2Q14093 348 aaPredicted RBP10.15□□□□□ -0.78
TFF3-202ENST00000398431 VMACQ2NL98 169 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 SHISA2Q6UWI4 295 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 FOXL2NBQ6ZUU3 175 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 DOK3Q7L591 496 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 CLDN22Q8N7P3 220 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 LRRC75AQ8NAA5 344 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 NSMAFQ92636 917 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 RCN3Q96D15 328 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 SGTBQ96EQ0 304 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 DUX5Q96PT3 197 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 DCLRE1CQ96SD1 692 aaKnown RBP10.15□□□□□ -0.78
TFF3-202ENST00000398431 OR2H1Q9GZK4 316 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 KCNN2Q9H2S1 579 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 TXNIPQ9H3M7 391 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 SMURF2Q9HAU4 748 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 CCNB1IP1Q9NPC3 277 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 CYSLTR2Q9NS75 346 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 EIF3KQ9UBQ5 218 aaKnown RBP10.15□□□□□ -0.78
TFF3-202ENST00000398431 RIMS3Q9UJD0 308 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 ZDHHC8Q9ULC8 765 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 PRPF19Q9UMS4 504 aaKnown RBP10.15□□□□□ -0.78
TFF3-202ENST00000398431 SH3GLB1Q9Y371 365 aa10.15□□□□□ -0.78
TFF3-202ENST00000398431 PLSCR5A0PG75 271 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 ISPDA4D126 451 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 NPIPB13A6NJU9 1138 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 NPIPB4C9JG80 1138 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 MCIDASD6RGH6 385 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 MRASO14807 208 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 FOXH1O75593 365 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 KRT36O76013 467 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 CST2P09228 141 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 ZNF12P17014 697 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 RBM34P42696 430 aaKnown RBP10.14□□□□□ -0.79
TFF3-202ENST00000398431 SLC6A9P48067 706 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 DAP3P51398 398 aaKnown RBP10.14□□□□□ -0.79
TFF3-202ENST00000398431 SEC61A1P61619 476 aaKnown RBP10.14□□□□□ -0.79
TFF3-202ENST00000398431 ZNF154Q13106 437 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 FHL1Q13642 323 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 C8orf82Q6P1X6 216 aaPredicted RBP10.14□□□□□ -0.79
TFF3-202ENST00000398431 Q6ZR03 302 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 LRRC28Q86X40 367 aaPredicted RBP10.14□□□□□ -0.79
TFF3-202ENST00000398431 CALHM3Q86XJ0 350 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 SLC30A8Q8IWU4 369 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 C1orf174Q8IYL3 243 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 ABHD4Q8TB40 342 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 ST7LQ8TDW4 575 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 SLC26A7Q8TE54 656 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 TMEM239Q8WW34 195 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 TAF15Q92804 592 aaKnown RBP eCLIP10.14□□□□□ -0.79
TFF3-202ENST00000398431 POP5Q969H6 163 aaKnown RBP10.14□□□□□ -0.79
TFF3-202ENST00000398431 C4orf45Q96LM5 186 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 EGLN1Q9GZT9 426 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 POFUT1Q9H488 388 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 PATZ1Q9HBE1 687 aaKnown RBP10.14□□□□□ -0.79
TFF3-202ENST00000398431 TMEM106BQ9NUM4 274 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 SCOCQ9UIL1 159 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 PURGQ9UJV8 347 aaKnown RBP10.14□□□□□ -0.79
TFF3-202ENST00000398431 NUP50Q9UKX7 468 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 INSIG2Q9Y5U4 225 aa10.14□□□□□ -0.79
TFF3-202ENST00000398431 SOX21Q9Y651 276 aaPredicted RBP10.14□□□□□ -0.79
TFF3-202ENST00000398431 MAGEA13PA6NCF6 341 aa10.13□□□□□ -0.79
TFF3-202ENST00000398431 DNAJC9-AS1A6NH13 148 aa10.13□□□□□ -0.79
TFF3-202ENST00000398431 OR5F1O95221 314 aa10.13□□□□□ -0.79
TFF3-202ENST00000398431 BAG2O95816 211 aa10.13□□□□□ -0.79
TFF3-202ENST00000398431 TNFAIP6P98066 277 aaPredicted RBP10.13□□□□□ -0.79
TFF3-202ENST00000398431 NFYCQ13952 458 aa10.13□□□□□ -0.79
TFF3-202ENST00000398431 ENDOGQ14249 297 aaKnown RBP10.13□□□□□ -0.79
TFF3-202ENST00000398431 MTX3Q5HYI7 312 aa10.13□□□□□ -0.79
TFF3-202ENST00000398431 INTS11Q5TA45 600 aaKnown RBP10.13□□□□□ -0.79
TFF3-202ENST00000398431 NANOGP8Q6NSW7 305 aa10.13□□□□□ -0.79
TFF3-202ENST00000398431 ZNF774Q6NX45 483 aa10.13□□□□□ -0.79
TFF3-202ENST00000398431 HACD2Q6Y1H2 254 aa10.13□□□□□ -0.79
TFF3-202ENST00000398431 HDDC2Q7Z4H3 204 aa10.13□□□□□ -0.79
TFF3-202ENST00000398431 ZNF283Q8N7M2 679 aa10.13□□□□□ -0.79
TFF3-202ENST00000398431 NR1H4Q96RI1 486 aaPredicted RBP10.13□□□□□ -0.79
TFF3-202ENST00000398431 SIGLEC11Q96RL6 698 aa10.13□□□□□ -0.79
TFF3-202ENST00000398431 DIRC2Q96SL1 478 aa10.13□□□□□ -0.79
TFF3-202ENST00000398431 ZNF184Q99676 751 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms