RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 THY1P04216 161 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 LCKP06239 509 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 RNASE1P07998 156 aaKnown RBP13.63□□□□□ -0.23
CUX2-202ENST00000397643 OR8G3PP0DMU2 310 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 FCGR1AP12314 374 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 RBM34P42696 430 aaKnown RBP13.63□□□□□ -0.23
CUX2-202ENST00000397643 UCP2P55851 309 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 SELENOVP59797 346 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 HNRNPA0Q13151 305 aaKnown RBP13.63□□□□□ -0.23
CUX2-202ENST00000397643 TSTQ16762 297 aaKnown RBP13.63□□□□□ -0.23
CUX2-202ENST00000397643 OR2T5Q6IEZ7 315 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 TTC33Q6PID6 262 aaPredicted RBP13.63□□□□□ -0.23
CUX2-202ENST00000397643 OR2T29Q8NH02 315 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 OR6X1Q8NH79 312 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 C11orf40Q8WZ69 217 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 RAB1CQ92928 201 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 TIMD4Q96H15 378 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 EPYCQ99645 322 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 ZMAT3Q9HA38 289 aaKnown RBP13.63□□□□□ -0.23
CUX2-202ENST00000397643 CDH20Q9HBT6 801 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 MMP26Q9NRE1 261 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 DECR2Q9NUI1 292 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 GLTPQ9NZD2 209 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 A0A1W2PRQ8 180 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 GADD45GO95257 159 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 IGHV1-46P01743 117 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 IGHV3-13P01766 116 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 RRM2P31350 389 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 MMP15P51511 669 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 DGCR6Q14129 220 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 FGD3Q5JSP0 725 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 FAM209AQ5JX71 171 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 RBMS3Q6XE24 437 aaKnown RBP13.62□□□□□ -0.23
CUX2-202ENST00000397643 LINC00114Q6XXX2 140 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 PYDC1Q8WXC3 89 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 ELMOD3Q96FG2 381 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 DHRS1Q96LJ7 313 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 PRSS27Q9BQR3 290 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 TMEM43Q9BTV4 400 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 BCL2L14Q9BZR8 327 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 C1orf198Q9H425 327 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 REEP1Q9H902 201 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 DNAJB9Q9UBS3 223 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 PURGQ9UJV8 347 aaKnown RBP13.62□□□□□ -0.23
CUX2-202ENST00000397643 NUP50Q9UKX7 468 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 TMCC3Q9ULS5 477 aa13.62□□□□□ -0.23
CUX2-202ENST00000397643 H0YHG0 523 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 TNFRSF11BO00300 401 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 TPD52L2O43399 206 aaKnown RBP13.61□□□□□ -0.23
CUX2-202ENST00000397643 TIPRLO75663 272 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 AHCYP23526 432 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 FASP25445 335 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 ZNF81P51508 661 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 IL13RA1P78552 427 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 GK3PQ14409 553 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 TBC1D28Q2M2D7 210 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 SPRNQ5BIV9 151 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 RRM2BQ7LG56 351 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 NKAIN4Q8IVV8 208 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 SYT14Q8NB59 555 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 OR4K5Q8NGD3 323 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 OR5J2Q8NH18 312 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 OR52J3Q8NH60 311 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 TMEM239Q8WW34 195 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 CCL17Q92583 94 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 SLC19A3Q9BZV2 496 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 SLITRK2Q9H156 845 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 S100A14Q9HCY8 104 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 DCAF16Q9NXF7 216 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 PLEK2Q9NYT0 353 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 UBAP1Q9NZ09 502 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 MED31Q9Y3C7 131 aa13.61□□□□□ -0.23
CUX2-202ENST00000397643 SAMHD1Q9Y3Z3 626 aaKnown RBP13.61□□□□□ -0.23
CUX2-202ENST00000397643 ZSCAN5BA6NJL1 495 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 POM121CA8CG34 1229 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 C11orf98E9PRG8 122 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 CLDN34H7C241 214 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 DHHO43323 396 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 SPRY3O43610 288 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 FOXH1O75593 365 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 MT-ATP6P00846 226 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 MMP7P09237 267 aaPredicted RBP13.6□□□□□ -0.23
CUX2-202ENST00000397643 PGA4P0DJD7 388 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 PGA3P0DJD8 388 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 ADORA3P0DMS8 318 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 MELKQ14680 651 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 OCLNQ16625 522 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 ARMCX4Q5H9R4 360 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 TMEM53Q6P2H8 277 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 ZNF730Q6ZMV8 503 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 SLC35D2Q76EJ3 337 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 RNF113BQ8IZP6 322 aaKnown RBP13.6□□□□□ -0.23
CUX2-202ENST00000397643 ICA1LQ8NDH6 482 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 TMEM255BQ8WV15 326 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 ACOT11Q8WXI4 607 aaPredicted RBP13.6□□□□□ -0.23
CUX2-202ENST00000397643 ZNF566Q969W8 418 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 ZNF426Q9BUY5 554 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 MAN2C1Q9NTJ4 1040 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 TAS2R5Q9NYW4 299 aa13.6□□□□□ -0.23
CUX2-202ENST00000397643 POLR3KQ9Y2Y1 108 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms