RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 CYR61O00622 381 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 ZNF749O43361 778 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 FADS1O60427 444 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 BRINP1O60477 761 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 PLGP00747 810 aaPredicted RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 FBXO45P0C2W1 286 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 GPR89BP0CG08 455 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 CTSEP14091 401 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 BIKQ13323 160 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 SSPNQ14714 243 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 NFATC4Q14934 902 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 CEBPEQ15744 281 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 USF2Q15853 346 aaPredicted RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 C2orf68Q2NKX9 166 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 EIPR1Q53HC9 387 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 GLT8D1Q68CQ7 371 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 CYB5R2Q6BCY4 276 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 CBLN3Q6UW01 205 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 TGIF2LXQ8IUE1 241 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 SLC22A18ASQ8N1D0 253 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 LGALS14Q8TCE9 139 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 SLC22A18Q96BI1 424 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 PELI1Q96FA3 418 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 PGLYRP3Q96LB9 341 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 CMTM3Q96MX0 182 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 CLCC1Q96S66 551 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 NAA11Q9BSU3 229 aaPredicted RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 TPSD1Q9BZJ3 242 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 NKX2-4Q9H2Z4 354 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 TMEM231Q9H6L2 316 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 OBP2AQ9NY56 170 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 COMMD9Q9P000 198 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 PISDQ9UG56 409 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 TP53TG5Q9Y2B4 290 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 HEBP2Q9Y5Z4 205 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 PCDH15Q96QU1 1955 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 SPAG17Q6Q759 2223 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 ANKRD20A5PA0PJZ0 165 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 GGT3PA6NGU5 568 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 F5H0A9 414 aaPredicted RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 PYCARD-AS1I3L0S3 204 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 J3QRE1 110 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 FLRT2O43155 660 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 FGF16O43320 207 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 NUDT14O95848 222 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 CSTAP01040 98 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 MAS1P04201 325 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 UCHL1P09936 223 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 VSIG10L2P0DP72 767 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 AQP2P41181 271 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 GLP1RP43220 463 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 LBX1P52954 281 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 MRPS10P82664 201 aaKnown RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 SRSF3P84103 164 aaKnown RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 HHEXQ03014 270 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 PLEKHN1Q494U1 663 aaPredicted RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 PYY3Q5JQD4 70 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 NCMAPQ5T1S8 102 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 OR10K2Q6IF99 312 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 SHISA6Q6ZSJ9 500 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 BEST3Q8N1M1 668 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 CA13Q8N1Q1 262 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 ZNF321PQ8N8H1 164 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 KDF1Q8NAX2 398 aaPredicted RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 MMABQ96EY8 250 aaPredicted RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 CPNE2Q96FN4 548 aaPredicted RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 Q96M85 177 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 GAL3ST4Q96RP7 486 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 NRIP2Q9BQI9 281 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 SOX7Q9BT81 388 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 KCNK15Q9H427 330 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 SEC61A2Q9H9S3 476 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 NOX4Q9NPH5 578 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 RCC2Q9P258 522 aaKnown RBP4.55□□□□□ -1.68
SSR1-202ENST00000397511 SLC35A3Q9Y2D2 325 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 PCDHGA1Q9Y5H4 931 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 PCNX3Q9H6A9 2034 aa4.55□□□□□ -1.68
SSR1-202ENST00000397511 TICRRQ7Z2Z1 1910 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 TRAV14DV4A0A0A6YYC5 116 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 CXorf65A6NEN9 183 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 C11orf98E9PRG8 122 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 C5orf67F2Z3F1 127 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 RBBP9O75884 186 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 IFNA17P01571 189 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 OR8G3PP0DMU2 310 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 NME1P15531 152 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 HIST1H1BP16401 226 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 RAB5AP20339 215 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 ZNF10P21506 573 aaPredicted RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 HNRNPA2B1P22626 353 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 DLSTP36957 453 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 ADH7P40394 386 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 F2RL1P55085 397 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 CD81P60033 236 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 UBE2MP61081 183 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 RPS15P62841 145 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 PJVKQ0ZLH3 352 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 FOXO1Q12778 655 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 KIR2DS3Q14952 304 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 PPA1Q15181 289 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms