RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CAPZA2P47755 286 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 LSM6P62312 80 aaKnown RBP18.59■□□□□ 0.57
CPNE1-204ENST00000397443 TSC22D1Q15714 1073 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 OR7E24Q6IFN5 339 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 SLC16A14Q7RTX9 510 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 LUZP2Q86TE4 346 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 SKA3Q8IX90 412 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 OR13F1Q8NGS4 319 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 OR52N5Q8NH56 324 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 C1orf198Q9H425 327 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 PLSCR4Q9NRQ2 329 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 Q9UFV3 132 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 PHYHO14832 338 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 ATXN7O15265 892 aaPredicted RBP18.59■□□□□ 0.57
CPNE1-204ENST00000397443 LRRTM2O43300 516 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 IL18BPO95998 194 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 CTSSP25774 331 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 MPGP29372 298 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 LIPKQ5VXJ0 399 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 VASH1Q7L8A9 365 aaPredicted RBP18.59■□□□□ 0.57
CPNE1-204ENST00000397443 FAM220AQ7Z4H9 259 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 FGFBP3Q8TAT2 258 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 ASB17Q8WXJ9 295 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 SLAMF6Q96DU3 332 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 PELI1Q96FA3 418 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 MRPL48Q96GC5 212 aaKnown RBP18.59■□□□□ 0.57
CPNE1-204ENST00000397443 ZFP3Q96NJ6 502 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 MROQ9BYG7 248 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 ELOVL3Q9HB03 270 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 BABAM2Q9NXR7 383 aa18.59■□□□□ 0.57
CPNE1-204ENST00000397443 CCDC160A6NGH7 325 aa18.58■□□□□ 0.56
CPNE1-204ENST00000397443 FARS2O95363 451 aaKnown RBP18.58■□□□□ 0.56
CPNE1-204ENST00000397443 CGAP01215 116 aa18.58■□□□□ 0.56
CPNE1-204ENST00000397443 CRHP06850 196 aa18.58■□□□□ 0.56
CPNE1-204ENST00000397443 IGHV1-2P23083 117 aa18.58■□□□□ 0.56
CPNE1-204ENST00000397443 TUBA1BP68363 451 aa18.58■□□□□ 0.56
CPNE1-204ENST00000397443 HIKESHIQ53FT3 197 aa18.58■□□□□ 0.56
CPNE1-204ENST00000397443 GPR107Q5VW38 600 aa18.58■□□□□ 0.56
CPNE1-204ENST00000397443 KCTD18Q6PI47 426 aaPredicted RBP18.58■□□□□ 0.56
CPNE1-204ENST00000397443 Q6ZT83 130 aa18.58■□□□□ 0.56
CPNE1-204ENST00000397443 TUBA1AQ71U36 451 aa18.58■□□□□ 0.56
CPNE1-204ENST00000397443 OR10S1Q8NGN2 331 aa18.58■□□□□ 0.56
CPNE1-204ENST00000397443 OR8B4Q96RC9 309 aa18.58■□□□□ 0.56
CPNE1-204ENST00000397443 METTL15A6NJ78 407 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 H3BSA7 217 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 RAD51DO75771 328 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 EGR3Q06889 387 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 AQP6Q13520 282 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 EIF2S3LQ2VIR3 472 aaKnown RBP18.57■□□□□ 0.56
CPNE1-204ENST00000397443 ZNF684Q5T5D7 378 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 SFXN3Q9BWM7 321 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 SLC5A6Q9Y289 635 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 EEF1E1-BLOC1S5C9J1V9 151 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 EEF1E1O43324 174 aaKnown RBP18.57■□□□□ 0.56
CPNE1-204ENST00000397443 NR4A1P22736 598 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 LIPNQ5VXI9 398 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 ZNF679Q8IYX0 411 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 SYS1Q8N2H4 156 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 HSD17B8Q92506 261 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 TRIM36Q9NQ86 728 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 FBXL3Q9UKT7 428 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 LRP12Q9Y561 859 aa18.57■□□□□ 0.56
CPNE1-204ENST00000397443 SIRT4Q9Y6E7 314 aaPredicted RBP18.57■□□□□ 0.56
CPNE1-204ENST00000397443 CIB4A0PJX0 185 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 E9PLN8 166 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 HLA-HP01893 362 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 PRB1P04280 392 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 CST2P09228 141 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 H2BFMP0C1H6 154 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 ZNF32P17041 273 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 CELP19835 753 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 CA7P43166 264 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 GBX2P52951 348 aaPredicted RBP18.56■□□□□ 0.56
CPNE1-204ENST00000397443 MLLT11Q13015 90 aaPredicted RBP18.56■□□□□ 0.56
CPNE1-204ENST00000397443 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.56■□□□□ 0.56
CPNE1-204ENST00000397443 CLVS1Q8IUQ0 354 aaPredicted RBP18.56■□□□□ 0.56
CPNE1-204ENST00000397443 OR1K1Q8NGR3 316 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 RNF133Q8WVZ7 376 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 BBC3Q96PG8 261 aaPredicted RBP18.56■□□□□ 0.56
CPNE1-204ENST00000397443 VKORC1Q9BQB6 163 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 NAA50Q9GZZ1 169 aaKnown RBP18.56■□□□□ 0.56
CPNE1-204ENST00000397443 KCNN2Q9H2S1 579 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 RNF121Q9H920 327 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 PLEK2Q9NYT0 353 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 GTF2A1LQ9UNN4 478 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 MEMO1Q9Y316 297 aa18.56■□□□□ 0.56
CPNE1-204ENST00000397443 ESPL1Q14674 2120 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 A0A1W2PR80 420 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 CCL21O00585 134 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 ABHD16AO95870 558 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 TACSTD2P09758 323 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 CD36P16671 472 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 RGS6P49758 472 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 TAF13Q15543 124 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 SSX1Q16384 188 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 ARL9Q6T311 187 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 GJC3Q8NFK1 279 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 BATF3Q9NR55 127 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 HSPB2A8KAH6 182 aa18.55■□□□□ 0.56
CPNE1-204ENST00000397443 SULT1C4O75897 302 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms