RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PERPQ96FX8 193 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 POM121L2Q96KW2 1035 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 CIB1Q99828 191 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 TEX12Q9BXU0 123 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 OR51B6Q9H340 312 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 MED20Q9H944 212 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 LHFPL6Q9Y693 200 aa18.3■□□□□ 0.52
TSPAN4-206ENST00000397408 LOC100509620A0A075B734 347 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 C5orf49A4QMS7 147 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 TVP23AA6NH52 213 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 GPRIN2O60269 458 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 OR4A8P0C604 315 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 FAM157BP0CG42 384 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 PAICSP22234 425 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 PTH2RP49190 550 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 GDI2P50395 445 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 PPP2R2BQ00005 443 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 C11orf71Q6IPW1 123 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 LYPD4Q6UWN0 246 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 PLEKHA8Q96JA3 519 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 HCAR1Q9BXC0 346 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 GRIP2Q9C0E4 1043 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 CXXC4Q9H2H0 198 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 MRPL22Q9NWU5 206 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 PLEK2Q9NYT0 353 aa18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 TMEFF2Q9UIK5 374 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-206ENST00000397408 OVOL3O00110 214 aa18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 RER1O15258 196 aa18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 SERPINF1P36955 418 aa18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 HTR5AP47898 357 aa18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 PTGES3Q15185 160 aaKnown RBP18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 TESK1Q15569 626 aa18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 CORO6Q6QEF8 472 aa18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 VASH1Q7L8A9 365 aaPredicted RBP18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 LINC00346Q8IVM7 164 aa18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 OR6K6Q8NGW6 343 aa18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 RBM4BQ9BQ04 359 aaKnown RBP18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 OSBPL10Q9BXB5 764 aa18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 GSX2Q9BZM3 304 aa18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 ENOPH1Q9UHY7 261 aa18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 NDRG4Q9ULP0 352 aaKnown RBP18.28■□□□□ 0.52
TSPAN4-206ENST00000397408 PRR23D1E9PI22 279 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 PRR23D2P0DMB1 279 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 ZNF823P16415 610 aa18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 EPHA2P29317 976 aa18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 GLRXP35754 106 aa18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 RPS23P62266 143 aaKnown RBP18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 CCDC92Q53HC0 331 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 PLBD1Q6P4A8 553 aa18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 LRRC75A-AS1Q8N1F1 130 aa18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 PQLC1Q8N2U9 271 aa18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 CDADC1Q9BWV3 514 aa18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 CACNG6Q9BXT2 260 aa18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 ZNF701Q9NV72 531 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 TVP23BQ9NYZ1 205 aa18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 COMMD3-BMI1R4GMX3 469 aa18.27■□□□□ 0.52
TSPAN4-206ENST00000397408 VSTM5A8MXK1 200 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 EI24O14681 340 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 COX5BP10606 129 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 FMO3P31513 532 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 GGT2P36268 569 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 ADAM8P78325 824 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 RAB35Q15286 201 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 SNAPC1Q16533 368 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 MSMPQ1L6U9 139 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 MST1LQ2TV78 715 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 SLC18B1Q6NT16 456 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 ZNF511Q8NB15 262 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 GJC3Q8NFK1 279 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 PTP4A1Q93096 173 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 OR51V1Q9H2C8 321 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 HINT3Q9NQE9 182 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 KCNG2Q9UJ96 466 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 CMAHPQ9Y471 501 aa18.26■□□□□ 0.51
TSPAN4-206ENST00000397408 OR6C6A6NF89 314 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 ERICH4A6NGS2 130 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 ZAR1LA6NP61 321 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 SYNGR3O43761 229 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 PAX1P15863 534 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 PCSK6P29122 969 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 WNT5AP41221 380 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 RPS27P42677 84 aaKnown RBP18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 ATP5J2P56134 94 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 SNRPD2P62316 118 aaKnown RBP18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 HIST1H3AP68431 136 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 MAP1AP78559 2803 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 EFNB3Q15768 340 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 SWI5Q1ZZU3 235 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 HIST2H3PS2Q5TEC6 136 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 LINC01590Q5TEZ4 76 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 ARFGEF3Q5TH69 2177 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 SLX4IPQ5VYV7 408 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 CFAP77Q6ZQR2 320 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 HIST2H3AQ71DI3 136 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 CPOQ8IVL8 374 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 ZNF101Q8IZC7 436 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 OR2AJ1Q8NGZ0 328 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 OR1F12Q8NHA8 337 aa18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 MRPL24Q96A35 216 aaKnown RBP18.25■□□□□ 0.51
TSPAN4-206ENST00000397408 TRMT61AQ96FX7 289 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms