RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 PRSS44E7EML9 344 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 SLC1A7O00341 560 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 THBDP07204 575 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 CBR1P16152 277 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 PEX19P40855 299 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 CXCR4P61073 352 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 CSNK2BP67870 215 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 PSG4Q00888 419 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 EIF2B1Q14232 305 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 KLHL22Q53GT1 634 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 DCXRQ7Z4W1 244 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 CDC20BQ86Y33 519 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 ZNF786Q8N393 782 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 OTOSQ8NHW6 89 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 OR2H1Q9GZK4 316 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 MRPS18AQ9NVS2 196 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 LAMP5Q9UJQ1 280 aa20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 EXOGQ9Y2C4 368 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-203ENST00000397397 RER1O15258 196 aa20.56■□□□□ 0.88
TSPAN4-203ENST00000397397 SLC15A1P46059 708 aa20.56■□□□□ 0.88
TSPAN4-203ENST00000397397 RAB40BQ12829 278 aa20.56■□□□□ 0.88
TSPAN4-203ENST00000397397 PABPC1L2AQ5JQF8 200 aa20.56■□□□□ 0.88
TSPAN4-203ENST00000397397 CFAP77Q6ZQR2 320 aa20.56■□□□□ 0.88
TSPAN4-203ENST00000397397 SSX8Q7RTT4 187 aa20.56■□□□□ 0.88
TSPAN4-203ENST00000397397 ZNF454Q8N9F8 522 aa20.56■□□□□ 0.88
TSPAN4-203ENST00000397397 OR10H4Q8NGA5 316 aa20.56■□□□□ 0.88
TSPAN4-203ENST00000397397 AKR7LQ8NHP1 331 aa20.56■□□□□ 0.88
TSPAN4-203ENST00000397397 TBX5Q99593 518 aa20.56■□□□□ 0.88
TSPAN4-203ENST00000397397 WNT5BQ9H1J7 359 aa20.56■□□□□ 0.88
TSPAN4-203ENST00000397397 C1orf198Q9H425 327 aa20.56■□□□□ 0.88
TSPAN4-203ENST00000397397 SCN3BQ9NY72 215 aa20.56■□□□□ 0.88
TSPAN4-203ENST00000397397 LRRK2Q5S007 2527 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 A1L4Q6 167 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 CYSRT1A8MQ03 144 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 SGCEO43556 437 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 PAX7P23759 505 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 ZNF83P51522 516 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 HIST1H3AP68431 136 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 PLP2Q04941 152 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 RAB39AQ14964 217 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 CCDC92Q53HC0 331 aaPredicted RBP20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 HIST2H3PS2Q5TEC6 136 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 ZNF774Q6NX45 483 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 HIST2H3AQ71DI3 136 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 OR52I1Q8NGK6 324 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 THEM6Q8WUY1 208 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 GGHQ92820 318 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 MAP6Q96JE9 813 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 MNTQ99583 582 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 RHNO1Q9BSD3 238 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 MOV10Q9HCE1 1003 aaKnown RBP20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 PLEK2Q9NYT0 353 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 COPS3Q9UNS2 423 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 KLHDC2Q9Y2U9 406 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 PCDHGB1Q9Y5G3 927 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 TMEM14AQ9Y6G1 99 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 DOPEY1Q5JWR5 2465 aa20.55■□□□□ 0.88
TSPAN4-203ENST00000397397 IRGMA1A4Y4 181 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 EFCAB10A6NFE3 127 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 ZNF670-ZNF695F2Z2N8 137 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 DOK2O60496 412 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 CLDN1O95832 211 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 FADS2O95864 444 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 LYNP07948 512 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 OR2T7P0C7T2 308 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 KIR2DL3P43628 341 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 IDH3GP51553 393 aaPredicted RBP20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 HIST2H2BCQ6DN03 193 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 ALDH16A1Q8IZ83 802 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 ZNF540Q8NDQ6 660 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 OR2T27Q8NH04 317 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 ST7LQ8TDW4 575 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 DACH2Q96NX9 599 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 ABHD6Q9BV23 337 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 NPAP1Q9NZP6 1156 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 PSORS1C1Q9UIG5 152 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 HECTD1Q9ULT8 2610 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 PTPN13Q12923 2485 aa20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 FLNBO75369 2602 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-203ENST00000397397 IQCMA0A1B0GVH7 501 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 CCDC159P0C7I6 412 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 IGFBP2P18065 325 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 ALOX5APP20292 161 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 RAB35Q15286 201 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 ELFN2Q5R3F8 820 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 RBM48Q5RL73 367 aaKnown RBP20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 AHSA2Q719I0 299 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 VASH1Q7L8A9 365 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 DMRTC2Q8IXT2 367 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 SLAMF6Q96DU3 332 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 ZNF75AQ96N20 296 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 AMELYQ99218 206 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 CENPMQ9NSP4 180 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 CNOT2Q9NZN8 540 aaKnown RBP20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 CRNNQ9UBG3 495 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 FBXL3Q9UKT7 428 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 MYRFQ9Y2G1 1151 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 TPRKBQ9Y3C4 175 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 PTGES3LE9PB15 166 aa20.53■□□□□ 0.88
TSPAN4-203ENST00000397397 J3QRE1 110 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms