RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ACKR4Q9NPB9 350 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 MMP26Q9NRE1 261 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 KCNG2Q9UJ96 466 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 FREM3P0C091 2139 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 C11orf98E9PRG8 122 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 PLRG1O43660 514 aaKnown RBP21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 EIF1BO60739 113 aaKnown RBP21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 ICOSLGO75144 302 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 CYB5AP00167 134 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 DCNP07585 359 aaKnown RBP21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 TPT1P13693 172 aaKnown RBP21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 S1PR1P21453 382 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 GDI1P31150 447 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 EIF1P41567 113 aaKnown RBP21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 GRK6P43250 576 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 ITPRIPL2Q3MIP1 535 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 OR10R2Q8NGX6 335 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 IGFLR1Q9H665 355 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 MSRAQ9UJ68 235 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 SLC22A13Q9Y226 551 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 VSIG4Q9Y279 399 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 CNTRLQ7Z7A1 2325 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 ZNF736B4DX44 427 aaPredicted RBP21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 TO15178 435 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 AIMP2Q13155 320 aaKnown RBP21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 SMCO1Q147U7 214 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 CD226Q15762 336 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 GFOD2Q3B7J2 385 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 BAP18Q8IXM2 172 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 PRSS35Q8N3Z0 413 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 STOML3Q8TAV4 291 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 NUDT19A8MXV4 375 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 EEF1E1-BLOC1S5C9J1V9 151 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 HAAOP46952 286 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 NKPD1Q17RQ9 610 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 ZNF550Q7Z398 422 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 TMPRSS9Q7Z410 1059 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 MISPQ8IVT2 679 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 MICU1Q9BPX6 476 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 SEMA6CQ9H3T2 930 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 IL23AQ9NPF7 189 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 KIF26BQ2KJY2 2108 aa21.62■■□□□ 1.05
CSNK1E-203ENST00000396832 SSX5O60225 188 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 APBB3O95704 486 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 CD74P04233 296 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 COL9A1P20849 921 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 BCL2L14Q9BZR8 327 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 DOCK8Q8NF50 2099 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 C5orf52A6NGY3 159 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 TMEM212A6NML5 194 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 F8VVB4 439 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 F8VWA3 439 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 SLC17A2O00624 439 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 ZBTB25P24278 435 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 PPM1FP49593 454 aaPredicted RBP21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 PPP1R1AQ13522 171 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 RBM39Q14498 530 aaKnown RBP21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 LYG2Q86SG7 212 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 CD163Q86VB7 1156 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 SLC30A7Q8NEW0 376 aa21.61■■□□□ 1.05
CSNK1E-203ENST00000396832 A0A0B4J2A0 478 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 HLA-GP17693 338 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 PJVKQ0ZLH3 352 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 OR10K2Q6IF99 312 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 ZNF704Q6ZNC4 412 aaPredicted RBP21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 OR4K17Q8NGC6 315 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 SLC22A8Q8TCC7 542 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 PHOSPHO1Q8TCT1 267 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 VSTM2LQ96N03 204 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 GAS2L1Q99501 681 aaPredicted RBP21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 NRIP2Q9BQI9 281 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 SLC17A5Q9NRA2 495 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 RCC2Q9P258 522 aaKnown RBP21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 SHPKQ9UHJ6 478 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 TMEM196Q5HYL7 178 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 KCTD9Q7L273 389 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 CDC20BQ86Y33 519 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 BCORP1Q8N888 145 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 AVL9Q8NBF6 648 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 C16orf52Q8NHV5 167 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 NKD1Q969G9 470 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 FOXRED1Q96CU9 486 aaPredicted RBP21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 KTI12Q96EK9 354 aaPredicted RBP21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 CST11Q9H112 138 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 GRHPRQ9UBQ7 328 aa21.6■■□□□ 1.05
CSNK1E-203ENST00000396832 SERINC4A6NH21 518 aa21.59■■□□□ 1.05
CSNK1E-203ENST00000396832 S100A6P06703 90 aa21.59■■□□□ 1.05
CSNK1E-203ENST00000396832 MESTQ5EB52 335 aa21.59■■□□□ 1.05
CSNK1E-203ENST00000396832 MDGA2Q7Z553 956 aa21.59■■□□□ 1.05
CSNK1E-203ENST00000396832 NAA40Q86UY6 237 aa21.59■■□□□ 1.05
CSNK1E-203ENST00000396832 PRR22Q8IZ63 422 aa21.59■■□□□ 1.05
CSNK1E-203ENST00000396832 PAQR4Q8N4S7 273 aaPredicted RBP21.59■■□□□ 1.05
CSNK1E-203ENST00000396832 OR4S1Q8NGB4 309 aa21.59■■□□□ 1.05
CSNK1E-203ENST00000396832 BADQ92934 168 aa21.59■■□□□ 1.05
CSNK1E-203ENST00000396832 Q9N2J8 555 aa21.59■■□□□ 1.05
CSNK1E-203ENST00000396832 YKT6O15498 198 aa21.59■■□□□ 1.05
CSNK1E-203ENST00000396832 CT45A8P0DMV1 189 aa21.59■■□□□ 1.05
CSNK1E-203ENST00000396832 CT45A9P0DMV2 189 aa21.59■■□□□ 1.05
CSNK1E-203ENST00000396832 FOLR2P14207 255 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms