RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 DOK3Q7L591 496 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 VAMP8Q9BV40 100 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 UBQLN3Q9H347 655 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 KCNG2Q9UJ96 466 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 TMEM129A0AVI4 362 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 SLC5A10A0PJK1 596 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 SELEP16581 610 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 BPIFB3P59826 476 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 RACK1P63244 317 aaKnown RBP12.83□□□□□ -0.36
COL4A3-202ENST00000396578 TAZQ16635 292 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 OR52I2Q8NH67 350 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 OR6C1Q96RD1 312 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 RAB18Q9NP72 206 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 DUSP13Q9UII6 198 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 ATG2BQ96BY7 2078 aa12.83□□□□□ -0.36
COL4A3-202ENST00000396578 SCGB1C2P0DMR2 95 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 POU3F3P20264 500 aaPredicted RBP12.82□□□□□ -0.36
COL4A3-202ENST00000396578 KRTDAPP60985 99 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 PLXDC2Q6UX71 529 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 ZNF485Q8NCK3 441 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 ZIC5Q96T25 663 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 LAMB1P07942 1786 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 SLC10A3P09131 477 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 CTBSQ01459 385 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 UBTD2Q8WUN7 234 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 AKR1E2Q96JD6 320 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 CCDC74BQ96LY2 380 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 BCO1Q9HAY6 547 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 PHIPQ8WWQ0 1821 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 OR7C2O60412 319 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 CIDEAO60543 219 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 ATXN1LP0C7T5 689 aaKnown RBP12.82□□□□□ -0.36
COL4A3-202ENST00000396578 EPHX3Q9H6B9 360 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 TAS2R4Q9NYW5 299 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 IGKV6-21A0A0C4DH24 114 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 DBX1A6NMT0 343 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 HCRTR1O43613 425 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 CLEC2LP0C7M8 214 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 OR8G1Q15617 311 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 RHOUQ7L0Q8 258 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 FAM71CQ8NEG0 241 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 RPUSD4Q96CM3 377 aaKnown RBP12.82□□□□□ -0.36
COL4A3-202ENST00000396578 DHRS9Q9BPW9 319 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 PLA2G12AQ9BZM1 189 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 F10P00742 488 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 TPPP2P59282 170 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 OR5I1Q13606 314 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 SLC17A1Q14916 467 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 SLC39A5Q6ZMH5 540 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 TMEFF1Q8IYR6 380 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 TMEM231Q9H6L2 316 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 POMT1Q9Y6A1 747 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 ZNF354AO60765 605 aaPredicted RBP12.82□□□□□ -0.36
COL4A3-202ENST00000396578 PIPP12273 146 aaPredicted RBP12.82□□□□□ -0.36
COL4A3-202ENST00000396578 MGMTP16455 207 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 GPR12P47775 334 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 ZNF534Q76KX8 674 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 GRINAQ7Z429 371 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 ATF6BQ99941 703 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 SMIM7Q9BQ49 75 aa12.82□□□□□ -0.36
COL4A3-202ENST00000396578 SMIM17P0DL12 118 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 ZNF787Q6DD87 383 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 RTL10Q7L3V2 364 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 C20orf27Q9GZN8 174 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 NTHL1P78549 312 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 TMEM88Q6PEY1 159 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 ZNF511Q8NB15 262 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 ZBTB44Q8NCP5 570 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 OR5AP2Q8NGF4 316 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 TMED6Q8WW62 240 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 FIZ1Q96SL8 496 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 C1QTNF3Q9BXJ4 246 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 OBP2AQ9NY56 170 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 G0S2P27469 103 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 AMTP48728 403 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 YPEL5P62699 121 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 ERHP84090 104 aaKnown RBP12.81□□□□□ -0.36
COL4A3-202ENST00000396578 FABP9Q0Z7S8 132 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 SYT14P1Q58G82 188 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 NCR3LG1Q68D85 454 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 OR2T2Q6IF00 324 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 ZNF2Q9BSG1 426 aaPredicted RBP12.81□□□□□ -0.36
COL4A3-202ENST00000396578 EGLN1Q9GZT9 426 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 ZNF768Q9H5H4 540 aaKnown RBP12.81□□□□□ -0.36
COL4A3-202ENST00000396578 C12orf10Q9HB07 376 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 DCAF16Q9NXF7 216 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 CD207Q9UJ71 328 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 ICE1Q9Y2F5 2266 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 CPEB3Q8NE35 698 aaKnown RBP12.81□□□□□ -0.36
COL4A3-202ENST00000396578 ACHEP22303 614 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 RPL12P30050 165 aaKnown RBP12.81□□□□□ -0.36
COL4A3-202ENST00000396578 JAG1P78504 1218 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 SEMA3BQ13214 749 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 LCN15Q6UWW0 184 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 LHFPL2Q6ZUX7 228 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 H1FNTQ75WM6 255 aaPredicted RBP12.81□□□□□ -0.36
COL4A3-202ENST00000396578 TM4SF18Q96CE8 201 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 STACQ99469 402 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 RTL8AQ9BWD3 113 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 MS4A8Q9BY19 250 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms