RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 A0A1W2PR64 198 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 A0A1W2PRV1 198 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 GGT3PA6NGU5 568 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 CD8B2A6NJW9 211 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM200CA6NKL6 621 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF814B7Z6K7 855 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 CD8BP10966 210 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 CEACAM1P13688 526 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 IL32P24001 234 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 RBMXP38159 391 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 KCNAB1Q14722 419 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 CHRFAM7AQ494W8 412 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 AWAT2Q6E213 333 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM81Q6P7N7 255 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 FAM198BQ6UWH4 519 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM179BQ7Z7N9 219 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 RNF128Q8TEB7 428 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 NKD1Q969G9 470 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ADAM19Q9H013 955 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 PLEKHJ1Q9NW61 149 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 KCNIP1Q9NZI2 227 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF222Q9UK12 451 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SLC5A6Q9Y289 635 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SLC35F4A4IF30 521 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 FAM172BPA6NC97 362 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 M0R135 149 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 LPLP06858 475 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 GCH1P30793 250 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 LSSP48449 732 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 RBP2P50120 134 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ROM1Q03395 351 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TATDN3Q17R31 274 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 GFOD2Q3B7J2 385 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SOWAHCQ53LP3 525 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 PRAMEF20Q5VT98 475 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 OR5M10Q6IEU7 315 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 MARCH3Q86UD3 253 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SNX29P2Q8IUI4 249 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 APOBEC3DQ96AK3 386 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF799Q96GE5 643 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 LMF1Q96S06 567 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 LIN28AQ9H9Z2 209 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TRABD2BA6NFA1 517 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TXNDC12O95881 172 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 LIMS3P0CW19 117 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 LIMS4P0CW20 117 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 CCNOP22674 350 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 PEBP1P30086 187 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ZP4Q12836 540 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SPRED2Q7Z698 418 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SMIM4Q8WVI0 70 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 APOBEC4Q8WW27 367 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TSLPQ969D9 159 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 THOC3Q96J01 351 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TCEAL2Q9H3H9 227 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 B9D1Q9UPM9 204 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 B4DXG7 233 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 SLC17A2O00624 439 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 TNFSF15O95150 251 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ZFPL1O95159 310 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 EFNA3P52797 238 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 LCN6P62502 163 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF573Q86YE8 665 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 RBM45Q8IUH3 476 aaKnown RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 ARMC10Q8N2F6 343 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 PTPMT1Q8WUK0 201 aaPredicted RBP3.06□□□□□ -1.92
VPS13C-203ENST00000395896 CYSLTR2Q9NS75 346 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 MAB21L2Q9Y586 359 aa3.06□□□□□ -1.92
VPS13C-203ENST00000395896 OR5H15A6NDH6 313 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 XRCC3O43542 346 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 DHRS3O75911 302 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 DXOO77932 396 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 AKAIN1P0CW23 69 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 OXA1LQ15070 435 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SHBQ15464 509 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SLC22A6Q4U2R8 563 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF615Q8N8J6 731 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 OR10G3Q8NGC4 313 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 OR4M1Q8NGD0 313 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ZFAND1Q8TCF1 268 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 UBL7Q96S82 380 aaPredicted RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SPSB2Q99619 263 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SOCS6O14544 535 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CA11O75493 328 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SEMG1P04279 462 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF35P13682 527 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CCL7P80098 99 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 MRPS34P82930 218 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 FAM209AQ5JX71 171 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 OR2G6Q5TZ20 316 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 FAM180AQ6UWF9 173 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 AMER3Q8N944 861 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 UXS1Q8NBZ7 420 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SNRNP27Q8WVK2 155 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 RASD2Q96D21 266 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ZCCHC4Q9H5U6 513 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 EPOPA6NHQ4 379 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SHISA7A6NL88 538 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 LRRC30A6NM36 301 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 NPIPB9F8W1W9 429 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms