RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 C11orf88Q6PI97 169 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 RBM15BQ8NDT2 890 aaKnown RBP11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 VPS37AQ8NEZ2 397 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 PPP1R35Q8TAP8 253 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 TSPEARQ8WU66 669 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 SLC35B4Q969S0 331 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 WDFY2Q96P53 400 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 SLC35A5Q9BS91 424 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 CLN8Q9UBY8 286 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 TAGLN3Q9UI15 199 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 CAPN7Q9Y6W3 813 aa11.27□□□□□ -0.61
VCPKMT-201ENST00000395859 MEGF11A6BM72 1044 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 TOX4O94842 621 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 NQO1P15559 274 aaKnown RBP11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 IGLL1P15814 213 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 PSMB10P40306 273 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 KIR2DS4P43632 304 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 BIDP55957 195 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 PPP1CBP62140 327 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 TXNL4AP83876 142 aaKnown RBP11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 PLP2Q04941 152 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 HIST3H3Q16695 136 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 DNAL1Q4LDG9 190 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 DEFB121Q5J5C9 76 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 CASC10Q5T4H9 136 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 LYPD2Q6UXB3 125 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 ASRGL1Q7L266 308 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 MAVSQ7Z434 540 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 LYG1Q8N1E2 194 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 KLHDC1Q8N7A1 406 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 LSMEM1Q8N8F7 131 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 OR8B3Q8NGG8 313 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 RP9Q8TA86 221 aaKnown RBP11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 WIPF2Q8TF74 440 aaPredicted RBP11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 MOGAT1Q96PD6 335 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 OR2V2Q96R30 315 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 OR8B2Q96RD0 313 aa11.26□□□□□ -0.61
VCPKMT-201ENST00000395859 LCE6AA0A183 80 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 IFNL4K9M1U5 179 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 SDHDO14521 159 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 CPSF4O95639 269 aaKnown RBP11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 F13BP05160 661 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 PGA4P0DJD7 388 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 PGA3P0DJD8 388 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 KITLGP21583 273 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 CCNOP22674 350 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 MVDP53602 400 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 EGFEM1PQ0D2K5 195 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 ZNF181Q2M3W8 571 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 DPY19L1Q2PZI1 675 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 ANXA8L1Q5VT79 327 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 C1orf122Q6ZSJ8 110 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 PTOV1Q86YD1 416 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 OR2Z1Q8NG97 314 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 ZNF607Q96SK3 696 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 SEPHS2Q99611 448 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 EBF4Q9BQW3 602 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 SPATA9Q9BWV2 254 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 NUF2Q9BZD4 464 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 AKTIPQ9H8T0 292 aa11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 GAR1Q9NY12 217 aaKnown RBP11.25□□□□□ -0.61
VCPKMT-201ENST00000395859 A0A1B0GWA3 101 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 C5orf49A4QMS7 147 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 UBDO15205 165 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 CYB5R3P00387 301 aaPredicted RBP11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 LIPFP07098 398 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 NR2F1P10589 423 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 IDO1P14902 403 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 LBPP18428 481 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 TNFSF4P23510 183 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 HTR2AP28223 471 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 CHI3L1P36222 383 aaPredicted RBP11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 ZNF133P52736 654 aaPredicted RBP11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 CLNS1AP54105 237 aaKnown RBP11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 STX1BP61266 288 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 NCALDP61601 193 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 EMX1Q04741 257 aaPredicted RBP11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 COQ5Q5HYK3 327 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 PGBD2Q6P3X8 592 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 NLRC3Q7RTR2 1065 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 ZNF420Q8TAQ5 688 aaPredicted RBP11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 ABHD4Q8TB40 342 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 LHX4Q969G2 390 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 TESCQ96BS2 214 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 SLC25A44Q96H78 314 aaPredicted RBP11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 TEX37Q96LM6 180 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 CCDC115Q96NT0 180 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 BTBD10Q9BSF8 475 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 MAN2C1Q9NTJ4 1040 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 KIF17Q9P2E2 1029 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 EIF3KQ9UBQ5 218 aaKnown RBP11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 U3KQK5 164 aa11.24□□□□□ -0.61
VCPKMT-201ENST00000395859 BBIP1A8MTZ0 92 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 LRRN3E7EW58 273 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 H0YHG0 523 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 TIMM8AO60220 97 aaPredicted RBP11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 QDPRP09417 244 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 T-ENOLP0DO92 83 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 ZNF32P17041 273 aa11.23□□□□□ -0.61
VCPKMT-201ENST00000395859 HSF2Q03933 536 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms