RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 SLC35D3Q5M8T2 416 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 NKAPLQ5M9Q1 402 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 DENND4AQ7Z401 1863 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 CDC20BQ86Y33 519 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 YAF2Q8IY57 180 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 SPAG16Q8N0X2 631 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 C16orf52Q8NHV5 167 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 MFRPQ9BY79 579 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 Q9N2J8 555 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 MPTX1A8MV57 137 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 LINC00587B1AMM8 73 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 GNALP38405 381 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 ACTBP60709 375 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 PRPS1P60891 318 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 ACTG1P63261 375 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 PMPCAQ10713 525 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 RNASE10Q5GAN6 216 aaKnown RBP12.9□□□□□ -0.34
CLIP2-203ENST00000395060 PAPD4Q6PIY7 484 aaKnown RBP12.9□□□□□ -0.34
CLIP2-203ENST00000395060 ACOT7LQ6ZUV0 252 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 ZNF321PQ8N8H1 164 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 PIGMQ9H3S5 423 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 CTSFQ9UBX1 484 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 EMC9Q9Y3B6 208 aa12.9□□□□□ -0.34
CLIP2-203ENST00000395060 TDRD6O60522 2096 aaKnown RBP12.9□□□□□ -0.35
CLIP2-203ENST00000395060 TMEM212A6NML5 194 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 SULT2B1O00204 365 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 ARPC3O15145 178 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 ADAP1O75689 374 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 SDHAP31040 664 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 GDI1P31150 447 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 DNASE1L1P49184 302 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 RPS21P63220 83 aaKnown RBP12.89□□□□□ -0.35
CLIP2-203ENST00000395060 C1orf61Q13536 156 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 TOMM34Q15785 309 aaPredicted RBP12.89□□□□□ -0.35
CLIP2-203ENST00000395060 ZNF74Q16587 644 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 SLC29A4Q7RTT9 530 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 TRAPPC6BQ86SZ2 158 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 PRSS58Q8IYP2 241 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 BCORP1Q8N888 145 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 C15orf40Q8WUR7 153 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 DCBLD2Q96PD2 775 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 GAL3ST4Q96RP7 486 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 CENPMQ9NSP4 180 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 GSKIPQ9P0R6 139 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 A0A087WV62 115 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 A0A1B0GV50 99 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 SGCEO43556 437 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 SMIM10L1P0DMW3 83 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 GNB3P16520 340 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 HRH1P35367 487 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 LBX1P52954 281 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 TMEM225Q6GV28 225 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 CCDC36Q8IYA8 594 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 NT5CQ8TCD5 201 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 SMIM10Q96HG1 83 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 EPHA6Q9UF33 1036 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 NDRG3Q9UGV2 375 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 FBXL21Q9UKT6 434 aa12.89□□□□□ -0.35
CLIP2-203ENST00000395060 TRBV23-1A0A0A0MS06 115 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 MSGN1A6NI15 193 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 SLC17A2O00624 439 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 RENP00797 406 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 TACR3P29371 465 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 SERPINF1P36955 418 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 MEOX2P50222 304 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 PNLIPRP2P54317 469 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 EGR4Q05215 589 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 DMWDQ09019 674 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 INPP5JQ15735 1006 aaPredicted RBP12.88□□□□□ -0.35
CLIP2-203ENST00000395060 LINC00114Q6XXX2 140 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 MED25Q71SY5 747 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 FAM122BQ7Z309 247 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 FJX1Q86VR8 437 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 AVL9Q8NBF6 648 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 TAAR8Q969N4 342 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 C20orf24Q9BUV8 137 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 TCEAL2Q9H3H9 227 aaPredicted RBP12.88□□□□□ -0.35
CLIP2-203ENST00000395060 SEMA6CQ9H3T2 930 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 THAP10Q9P2Z0 257 aaPredicted RBP12.88□□□□□ -0.35
CLIP2-203ENST00000395060 KLF15Q9UIH9 416 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 XKRYO14609 159 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 FBXO24O75426 580 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 SERPINA5P05154 406 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 CELA2BP08218 269 aaPredicted RBP12.88□□□□□ -0.35
CLIP2-203ENST00000395060 CT45A8P0DMV1 189 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 CT45A9P0DMV2 189 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 CSRP1P21291 193 aaKnown RBP12.88□□□□□ -0.35
CLIP2-203ENST00000395060 CD96P40200 585 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 CT45A2Q5DJT8 189 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 OR13C3Q8NGS6 347 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 MARCH1Q8TCQ1 289 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 TM4SF19Q96DZ7 209 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 RRNAD1Q96FB5 475 aaKnown RBP12.88□□□□□ -0.35
CLIP2-203ENST00000395060 ADOQ96SZ5 270 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 MMP25Q9NPA2 562 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 CKLFQ9UBR5 152 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 TRBV5-7A0A0A0MS05 114 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 LINC01565O15544 149 aa12.88□□□□□ -0.35
CLIP2-203ENST00000395060 EIF3GO75821 320 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLIP2-203ENST00000395060 OR2F2O95006 317 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms