RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 PPP1R3CQ9UQK1 317 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 CCDC187A0A096LP49 1063 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 TMPRSS11DO60235 418 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 IGLV3-27P01718 113 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 ARNTP27540 789 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 SDHAP31040 664 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 TESK1Q15569 626 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 KLHDC8BQ8IXV7 354 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 FAM109AQ8N4B1 249 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 OR10K1Q8NGX5 313 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 OR51H1Q8NH63 302 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 C16orf52Q8NHV5 167 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 C20orf85Q9H1P6 137 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 OR52A5Q9H2C5 316 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 OPA3Q9H6K4 179 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 CLEC2DQ9UHP7 191 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 PURGQ9UJV8 347 aaKnown RBP9.48□□□□□ -0.89
COL4A6-203ENST00000394872 OR6C65A6NJZ3 312 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 ABCD4O14678 606 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 PRKNO60260 465 aaPredicted RBP9.48□□□□□ -0.89
COL4A6-203ENST00000394872 TBPP20226 339 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 PPT1P50897 306 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 HNRNPFP52597 415 aaKnown RBP9.48□□□□□ -0.89
COL4A6-203ENST00000394872 DUSP8Q13202 625 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 ALKBH6Q3KRA9 238 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 EMC4Q5J8M3 183 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 PRAMEF5Q5TYX0 476 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 PRAMEF6Q5VXH4 476 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 TFAP2EQ6VUC0 442 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 C1orf87Q8N0U7 546 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 PHYHIPQ92561 330 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 SLCO4A1Q96BD0 722 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 MVB12AQ96EY5 273 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 REEP6Q96HR9 211 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 PDCD1LG2Q9BQ51 273 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 CLEC1BQ9P126 229 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 FAM96BQ9Y3D0 163 aa9.48□□□□□ -0.89
COL4A6-203ENST00000394872 CLN3Q13286 438 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 ZNF266Q14584 549 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 ACKR1Q16570 336 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 IAH1Q2TAA2 248 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-203ENST00000394872 PTRH1Q86Y79 214 aaKnown RBP9.47□□□□□ -0.89
COL4A6-203ENST00000394872 SVBPQ8N300 66 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 A0A1B0GUL6 1792 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 LOC107986453A0A1B0GWG9 222 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 OIP5O43482 229 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 YIF1AO95070 293 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 GPR3P46089 330 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 KDM4DQ6B0I6 523 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 NRARPQ7Z6K4 114 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 PRSS35Q8N3Z0 413 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 TMEM102Q8N9M5 508 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-203ENST00000394872 TERB2Q8NHR7 220 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 ST8SIA1Q92185 356 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 KIR2DS1A0A191URI9 304 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 TRDV1A0A1B0GX56 115 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 METTL12A8MUP2 240 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 NUPL2O15504 423 aaKnown RBP9.47□□□□□ -0.89
COL4A6-203ENST00000394872 HIST1H1CP16403 213 aaKnown RBP9.47□□□□□ -0.89
COL4A6-203ENST00000394872 KIR2DS4P43632 304 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 UBE2G2P60604 165 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 SNRPGP62308 76 aaKnown RBP9.47□□□□□ -0.89
COL4A6-203ENST00000394872 SPEM2Q0P670 501 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 DBPQ10586 325 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-203ENST00000394872 KIR2DS1Q14954 304 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 Q6ZS52 159 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 LGI3Q8N145 548 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 TEAD3Q99594 435 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 EXOSC3Q9NQT5 275 aaKnown RBP9.47□□□□□ -0.89
COL4A6-203ENST00000394872 CTSFQ9UBX1 484 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 SLCO1B1Q9Y6L6 691 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 ITGB4P16144 1822 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 RAB5CP51148 216 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 CCR6P51684 374 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 FAM74A1Q5RGS3 127 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 Q6ZNB5 142 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 GAB3Q8WWW8 586 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 MOB1AQ9H8S9 216 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 I6L893 689 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-203ENST00000394872 M0R135 149 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 TRAF3IP2O43734 574 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-203ENST00000394872 PCSK6P29122 969 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 GPR12P47775 334 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 HYAL1Q12794 435 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 OPCMLQ14982 345 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 RTL8BQ17RB0 113 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 LHX8Q68G74 356 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 C15orf54Q8N8G6 183 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 OR1M1Q8NGA1 313 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 NUDT8Q8WV74 236 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 ZNF799Q96GE5 643 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 PLK3Q9H4B4 646 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 MTCH1Q9NZJ7 389 aa9.47□□□□□ -0.89
COL4A6-203ENST00000394872 ADH4P08319 380 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 SSX9Q7RTT3 188 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 SLC30A7Q8NEW0 376 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 SLC35E1Q96K37 410 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 CEACAM5P06731 702 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 ZDHHC11BP0C7U3 371 aa9.46□□□□□ -0.89
COL4A6-203ENST00000394872 EMDP50402 254 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms