RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 ZMYND19Q96E35 227 aaPredicted RBP17.03■□□□□ 0.32
HOXC6-202ENST00000394331 CSAG2Q9Y5P2 127 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 TRAV18A0A075B6X5 111 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 C9JQL5 133 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 RPL36A-HNRNPH2H7BZ11 118 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 CDC40O60508 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
HOXC6-202ENST00000394331 ZIC2O95409 532 aaPredicted RBP17.03■□□□□ 0.32
HOXC6-202ENST00000394331 SLC35G6P0C7Q6 338 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 ZNF888P0CJ79 500 aaPredicted RBP17.03■□□□□ 0.32
HOXC6-202ENST00000394331 CD80P33681 288 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 SLC26A5P58743 744 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 CYCSP99999 105 aaKnown RBP17.03■□□□□ 0.32
HOXC6-202ENST00000394331 OR7G2Q8NG99 324 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 OR8S1Q8NH09 359 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 RNF166Q96A37 237 aaPredicted RBP17.03■□□□□ 0.32
HOXC6-202ENST00000394331 S100PBPQ96BU1 408 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 AKR1E2Q96JD6 320 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 WDR45Q9Y484 360 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 A0A0B4J2A0 478 aa17.02■□□□□ 0.32
HOXC6-202ENST00000394331 MKRN2OSH3BPM6 223 aa17.02■□□□□ 0.32
HOXC6-202ENST00000394331 TCAPO15273 167 aa17.02■□□□□ 0.32
HOXC6-202ENST00000394331 CA3P07451 260 aa17.02■□□□□ 0.32
HOXC6-202ENST00000394331 TBC1D3HP0C7X1 549 aa17.02■□□□□ 0.32
HOXC6-202ENST00000394331 CX3CR1P49238 355 aa17.02■□□□□ 0.32
HOXC6-202ENST00000394331 NANOS3P60323 173 aaKnown RBP17.02■□□□□ 0.32
HOXC6-202ENST00000394331 YOD1Q5VVQ6 348 aaPredicted RBP17.02■□□□□ 0.32
HOXC6-202ENST00000394331 ADAM5Q6NVV9 412 aa17.02■□□□□ 0.32
HOXC6-202ENST00000394331 ZDHHC22Q8N966 263 aa17.02■□□□□ 0.32
HOXC6-202ENST00000394331 COL26A1Q96A83 441 aa17.02■□□□□ 0.32
HOXC6-202ENST00000394331 FAM131CQ96AQ9 280 aa17.02■□□□□ 0.32
HOXC6-202ENST00000394331 SHPKQ9UHJ6 478 aa17.02■□□□□ 0.32
HOXC6-202ENST00000394331 MKI67P46013 3256 aaKnown RBP17.02■□□□□ 0.32
HOXC6-202ENST00000394331 PRSS38A1L453 326 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 SEC14L6B5MCN3 397 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 AMY2AP04746 511 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 SLC6A6P31641 620 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 MAP3K8P41279 467 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 LPAR6P43657 344 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF684Q5T5D7 378 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 ARL14Q8N4G2 192 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 COMMD1Q8N668 190 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 OR13C8Q8NGS7 320 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 OR6X1Q8NH79 312 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 ASB17Q8WXJ9 295 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 RSC1A1Q92681 617 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 CDS1Q92903 461 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 YPEL4Q96NS1 127 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 FKRPQ9H9S5 495 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 TBC1D29Q9UFV1 150 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 CDV3Q9UKY7 258 aaKnown RBP17.02■□□□□ 0.31
HOXC6-202ENST00000394331 FLVCR1Q9Y5Y0 555 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 NUP210LQ5VU65 1888 aa17.02■□□□□ 0.31
HOXC6-202ENST00000394331 A0A087X0M5 115 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 A0A1B0GX30 115 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 SLC31A1O15431 190 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF432O94892 652 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 GDI1P31150 447 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 TNFRSF4P43489 277 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 DIO1P49895 249 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 SULT1A2P50226 295 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 OR2B8PP59922 312 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 BIKQ13323 160 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 ARHGAP11BQ3KRB8 267 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 SLC35D3Q5M8T2 416 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF614Q8N883 585 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 OR1J1Q8NGS3 322 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF417Q8TAU3 575 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 SERINC2Q96SA4 455 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 CBY1Q9Y3M2 126 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 TRBV5-7A0A0A0MS05 114 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 THBS1P07996 1170 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 COX5BP10606 129 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 RAB4AP20338 218 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 TLX1P31314 330 aaPredicted RBP17.01■□□□□ 0.31
HOXC6-202ENST00000394331 ADPRHP54922 357 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF836Q6ZNA1 936 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF775Q96BV0 537 aaPredicted RBP17.01■□□□□ 0.31
HOXC6-202ENST00000394331 AQP10Q96PS8 301 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 ZNF559Q9BR84 538 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 SYT4Q9H2B2 425 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 SRMSQ9H3Y6 488 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 C6orf106Q9H6K1 298 aaPredicted RBP17.01■□□□□ 0.31
HOXC6-202ENST00000394331 FN3KRPQ9HA64 309 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 CUTCQ9NTM9 273 aa17.01■□□□□ 0.31
HOXC6-202ENST00000394331 OR10H2O60403 315 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 NME2P22392 152 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 AKR1C3P42330 323 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 KIR2DL1P43626 348 aaPredicted RBP17■□□□□ 0.31
HOXC6-202ENST00000394331 SEC13P55735 322 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 KIAA0141Q14154 515 aaPredicted RBP17■□□□□ 0.31
HOXC6-202ENST00000394331 MEF2DQ14814 521 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 ISOC2Q96AB3 205 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 SEH1LQ96EE3 360 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 RNF126Q9BV68 326 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 BCO1Q9HAY6 547 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 DUSP22Q9NRW4 184 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 DOK2O60496 412 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 YIF1AO95070 293 aa17■□□□□ 0.31
HOXC6-202ENST00000394331 SNRNP70P08621 437 aaKnown RBP17■□□□□ 0.31
HOXC6-202ENST00000394331 CDPF1Q6NVV7 123 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms