RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 RER1O15258 196 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 AHCYL1O43865 530 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 SNAP29O95721 258 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 F12P00748 615 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 RENP00797 406 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 NGFP01138 241 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 TFP02787 698 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 GYPBP06028 91 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 DBHP09172 617 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 CLUP10909 449 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 BMP4P12644 408 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 POU1F1P28069 291 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 MPV17P39210 176 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 HTR5AP47898 357 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 PPOXP50336 477 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 EFNA4P52798 201 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 UCP2P55851 309 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 PCBD1P61457 104 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 CRMP1Q14194 572 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 SLC36A3Q495N2 470 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 CCDC92Q53HC0 331 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 C1orf146Q5VVC0 180 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 RGS7BPQ6MZT1 257 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 TMEM154Q6P9G4 183 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 CLEC2AQ6UVW9 174 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 CLEC9AQ6UXN8 241 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 VASH1Q7L8A9 365 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 LINC00346Q8IVM7 164 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 LINC00471Q8N535 108 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 SLC37A3Q8NCC5 494 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 NPEPL1Q8NDH3 523 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR1J2Q8NGS2 313 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 SLC25A40Q8TBP6 338 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 GIPC3Q8TF64 312 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 UTP4Q969X6 686 aaKnown RBP6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 DGCR6LQ9BY27 220 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 REG4Q9BYZ8 158 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 C1orf198Q9H425 327 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 MED20Q9H944 212 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 NTN4Q9HB63 628 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 PLEK2Q9NYT0 353 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 IL20Q9NYY1 176 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 TAAR3PQ9P1P4 343 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 POLR1DQ9Y2S0 133 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 LHFPL6Q9Y693 200 aa6.58□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZANQ9Y493 2812 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 FAM183AA6NL82 134 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 H3BN98 237 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 M0R233 179 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 SGCEO43556 437 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 SYNGR3O43761 229 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 NCR1O76036 304 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 PTHP01270 115 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 HLA-DQA2P01906 255 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 FOSL1P15407 271 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 CRABP1P29762 137 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 RBMXP38159 391 aaKnown RBP6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 MAGEB1P43366 347 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 RPS23P62266 143 aaKnown RBP6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 TEKQ02763 1124 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 KRTAP1-1Q07627 177 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 SCRN3Q0VDG4 424 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 AQP6Q13520 282 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 NKPD1Q17RQ9 610 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZNF362Q5T0B9 420 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 DNM1P34Q6PK57 102 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 CFAP77Q6ZQR2 320 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 BIVMQ86UB2 503 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 ZBTB46Q86UZ6 589 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 PAPD5Q8NDF8 572 aaKnown RBP6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 PROKR2Q8NFJ6 384 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 SLC26A10Q8NG04 563 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR2T33Q8NG76 320 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR10H5Q8NGA6 315 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 SYNPRQ8TBG9 265 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 TEX47Q8TBZ9 253 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 C10orf105Q8TEF2 133 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 IPCEF1Q8WWN9 437 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 FAM168AQ92567 244 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 OTULINQ96BN8 352 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 C4orf45Q96LM5 186 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 DDOQ99489 341 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 HCAR1Q9BXC0 346 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 BCL2L14Q9BZR8 327 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR2J1Q9GZK6 312 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 RACGAP1Q9H0H5 632 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 WDR76Q9H967 626 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 MRPL22Q9NWU5 206 aaKnown RBP6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 DNAJB9Q9UBS3 223 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 REV1Q9UBZ9 1251 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 GRIP1Q9Y3R0 1128 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 FKBP7Q9Y680 259 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 SVEP1Q4LDE5 3571 aa6.57□□□□□ -1.36
HMGB3P1-201ENST00000393368 ACANP16112 2415 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 A0A096LNT2 108 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 OR6C6A6NF89 314 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 VSTM5A8MXK1 200 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 IDH3BO43837 385 aa6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 MITFO75030 526 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P1-201ENST00000393368 ATP5HO75947 161 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms