RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ZNFX1Q9P2E3 1918 aaKnown RBP13.57□□□□□ -0.24
CCDC50-201ENST00000392455 DND1Q8IYX4 353 aaKnown RBP13.57□□□□□ -0.24
CCDC50-201ENST00000392455 LSMEM1Q8N8F7 131 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 POM121L2Q96KW2 1035 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 MACROD1Q9BQ69 325 aa13.57□□□□□ -0.24
CCDC50-201ENST00000392455 DDX31Q9H8H2 851 aaKnown RBP13.57□□□□□ -0.24
CCDC50-201ENST00000392455 KDM4EB2RXH2 506 aaPredicted RBP13.56□□□□□ -0.24
CCDC50-201ENST00000392455 SHHQ15465 462 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 ENTPD8Q5MY95 495 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 AAED1Q7RTV5 226 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 GOT1L1Q8NHS2 421 aaPredicted RBP13.56□□□□□ -0.24
CCDC50-201ENST00000392455 UBE2ZQ9H832 354 aaPredicted RBP13.56□□□□□ -0.24
CCDC50-201ENST00000392455 OSGIN1Q9UJX0 560 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 NFS1Q9Y697 457 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 CDK2AP1O14519 115 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 FOXD2O60548 495 aaPredicted RBP13.56□□□□□ -0.24
CCDC50-201ENST00000392455 TNFSF8P32971 234 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 GJA4P35212 333 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 PARD6AQ9NPB6 346 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 NDUFB11Q9NX14 153 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 ARSAP15289 507 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 TGFBR1P36897 503 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 LMAN1LQ9HAT1 526 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 FBXL2Q9UKC9 423 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 SPTBN1Q01082 2364 aaKnown RBP13.56□□□□□ -0.24
CCDC50-201ENST00000392455 POM121CA8CG34 1229 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 LDB3O75112 727 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 VAMP5O95183 116 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 TIMP1P01033 207 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 FAM26DQ5JW98 314 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 ELF4Q99607 663 aaPredicted RBP13.56□□□□□ -0.24
CCDC50-201ENST00000392455 NTMT1Q9BV86 223 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 MYO7BQ6PIF6 2116 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 M0R2Z0 102 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 RAD52P43351 418 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 EDDM3BP56851 147 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 CARD18P57730 90 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 OR8G1Q15617 311 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 ZNF547Q8IVP9 402 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 NAGSQ8N159 534 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 TTC9BQ8N6N2 239 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 GALMQ96C23 342 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 EXOGQ9Y2C4 368 aaKnown RBP13.56□□□□□ -0.24
CCDC50-201ENST00000392455 ZNF593O00488 134 aaPredicted RBP13.56□□□□□ -0.24
CCDC50-201ENST00000392455 APEHP13798 732 aaKnown RBP13.56□□□□□ -0.24
CCDC50-201ENST00000392455 TCN2P20062 427 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 TMEM106AQ96A25 262 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 ZNF778Q96MU6 729 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 GSX2Q9BZM3 304 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 INTS1Q8N201 2190 aaKnown RBP13.56□□□□□ -0.24
CCDC50-201ENST00000392455 AQP7O14520 342 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 ARNTP27540 789 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 CCR9P51686 369 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 CLDN2P57739 230 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 PJVKQ0ZLH3 352 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 THEM4Q5T1C6 240 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 DOK3Q7L591 496 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 DNAJC5GQ8N7S2 189 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 MIEN1Q9BRT3 115 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 APOOQ9BUR5 198 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 NTN4Q9HB63 628 aa13.56□□□□□ -0.24
CCDC50-201ENST00000392455 ZNF629Q9UEG4 869 aaPredicted RBP13.56□□□□□ -0.24
CCDC50-201ENST00000392455 DOCK11Q5JSL3 2073 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 TRAV36DV7A0A075B6V5 113 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 KIR2DS2P43631 304 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 LRRC18Q8N456 261 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 ACOT4Q8N9L9 421 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 SCCPDHQ8NBX0 429 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 CST2P09228 141 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 COX6CP09669 75 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 NTHL1P78549 312 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 MEX3DQ86XN8 651 aaKnown RBP13.55□□□□□ -0.24
CCDC50-201ENST00000392455 FANCMQ8IYD8 2048 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 MS4A18H0YCH9 400 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 CNMDO75829 334 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 ATP1B1P05026 303 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 OR5G3P0C626 314 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 CPMP14384 443 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 MS4A18Q3C1V0 323 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 LHX4Q969G2 390 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 TXLNGYQ9BZA5 131 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 SEBOXQ9HB31 216 aaPredicted RBP13.55□□□□□ -0.24
CCDC50-201ENST00000392455 COL1A1P02452 1464 aaPredicted RBP13.55□□□□□ -0.24
CCDC50-201ENST00000392455 TRDV1A0A1B0GX56 115 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 K7ERU9 68 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 SSTR4P31391 388 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 GPM6AP51674 278 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 Q3ZCU0 254 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 PIP5KL1Q5T9C9 394 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 CYB561A3Q8NBI2 242 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 HES7Q9BYE0 225 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 IGSF5Q9NSI5 407 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 HCFC1R1Q9NWW0 138 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 ELOBQ15370 118 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 PLAC9Q5JTB6 97 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 OR7E24Q6IFN5 339 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 MBOAT2Q6ZWT7 520 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 SLCO4A1Q96BD0 722 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 FAM3DQ96BQ1 224 aa13.55□□□□□ -0.24
CCDC50-201ENST00000392455 TIMM29Q9BSF4 260 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms