RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SIGLEC6O43699 453 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 CTAG2O75638 210 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 TM4SF4P48230 202 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 UBE2KP61086 200 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 CLINT1Q14677 625 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 Q6ZRG5 221 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 FAM160A2Q8N612 972 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 BCORP1Q8N888 145 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 TSTD1Q8NFU3 115 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 KCNG3Q8TAE7 436 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 BMFQ96LC9 184 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 SFXN1Q9H9B4 322 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 TMED7Q9Y3B3 224 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 FBXO7Q9Y3I1 522 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 SEC14L5O43304 696 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZNF354AO60765 605 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 CEACAM5P06731 702 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 EIF2S3LQ2VIR3 472 aaKnown RBP11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 PDZD11Q5EBL8 140 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR56B1Q8NGI3 324 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 DDIT4LQ96D03 193 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 CMSS1Q9BQ75 279 aaKnown RBP11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 EMC6Q9BV81 110 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 DCTN6O00399 190 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 OGG1O15527 345 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 SLC34A2O95436 690 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 SLC17A1Q14916 467 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 ARL6IP1Q15041 203 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 MLF2Q15773 248 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 EXOSC6Q5RKV6 272 aaKnown RBP11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 C16orf52Q8NHV5 167 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 NPAS1Q99742 590 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 CHST6Q9GZX3 395 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 C1orf198Q9H425 327 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 FN3KRPQ9HA64 309 aa11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 EXOSC3Q9NQT5 275 aaKnown RBP11.93□□□□□ -0.5
TRAPPC9-201ENST00000389328 CTDSPLO15194 276 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 NUDT21O43809 227 aaKnown RBP11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 SEMA7AO75326 666 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 DIRAS3O95661 229 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 CDKN2AP42771 156 aaKnown RBP11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 RAB13P51153 203 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 IDH3GP51553 393 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 GPR85P60893 370 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 KIAA0141Q14154 515 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 ANKRD16Q6P6B7 361 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 FBXW12Q6X9E4 464 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 TMEM156Q8N614 296 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR4D6Q8NGJ1 314 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 BADQ92934 168 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 NICN1Q9BSH3 213 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 RHOFQ9HBH0 211 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 C1orf123Q9NWV4 160 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 A0A087WV62 115 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 IMPA2O14732 288 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 GALR3O60755 368 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZGLP1P0C6A0 271 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 EPHA1P21709 976 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 HTRA4P83105 476 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 ETFDHQ16134 617 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZNF695Q8IW36 515 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 NKAIN3Q8N8D7 197 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 CMBLQ96DG6 245 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 ADAT1Q9BUB4 502 aaKnown RBP11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR11A1Q9GZK7 315 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZNF705GA8MUZ8 300 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 S100PP25815 95 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 DHPSP49366 369 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 TAS2R46P59540 309 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 RPL27P61353 136 aaKnown RBP11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 EEF1A1P68104 462 aaKnown RBP11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 PPP1R1AQ13522 171 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 WDR38Q5JTN6 314 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 ALKBH2Q6NS38 261 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 FKRPQ9H9S5 495 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 IL23AQ9NPF7 189 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 SLC7A11Q9UPY5 501 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 KIR2DS5A0A0G2JLQ3 304 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 A0A0G2JNG1 304 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 ZNF98A6NK75 572 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 KIR2DS3K7RE56 304 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 KIR2DS5Q14953 304 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 DCAF12L2Q5VW00 463 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 BEND4Q6ZU67 534 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 SLC16A13Q7RTY0 426 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 SLC22A8Q8TCC7 542 aa11.92□□□□□ -0.5
TRAPPC9-201ENST00000389328 SGCBQ16585 318 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 SLC30A7Q8NEW0 376 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 OR10AC1Q8NH08 325 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 CHRDQ9H2X0 955 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 PLEK2Q9NYT0 353 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 PCDHGA9Q9Y5G4 932 aaKnown RBP11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 KPTNQ9Y664 436 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 DOCK3Q8IZD9 2030 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 A0A087WUJ7 227 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 FAM74A7A6NL05 159 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 TIMP1P01033 207 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 BIDP55957 195 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 EGR3Q06889 387 aa11.91□□□□□ -0.5
TRAPPC9-201ENST00000389328 FUT5Q11128 374 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms