RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 CNBD2Q96M20 576 aa16.36■□□□□ 0.21
SMN2-202ENST00000380742 CNN2Q99439 309 aaKnown RBP16.36■□□□□ 0.21
SMN2-202ENST00000380742 WACQ9BTA9 647 aa16.36■□□□□ 0.21
SMN2-202ENST00000380742 OR2H1Q9GZK4 316 aa16.36■□□□□ 0.21
SMN2-202ENST00000380742 WNT5BQ9H1J7 359 aa16.36■□□□□ 0.21
SMN2-202ENST00000380742 CRNNQ9UBG3 495 aaPredicted RBP16.36■□□□□ 0.21
SMN2-202ENST00000380742 GDF2Q9UK05 429 aaPredicted RBP16.36■□□□□ 0.21
SMN2-202ENST00000380742 PCDHGB5Q9Y5G0 923 aa16.36■□□□□ 0.21
SMN2-202ENST00000380742 TIMM10BQ9Y5J6 103 aa16.36■□□□□ 0.21
SMN2-202ENST00000380742 SNTNA6NMZ2 147 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 RER1O15258 196 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 DENRO43583 198 aaKnown RBP16.35■□□□□ 0.21
SMN2-202ENST00000380742 RAB36O95755 333 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 IGLV1-44P01699 117 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 CELA3BP08861 270 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 SBK2P0C263 348 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 EPXP11678 715 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 IDH3GP51553 393 aaPredicted RBP16.35■□□□□ 0.21
SMN2-202ENST00000380742 SCRN3Q0VDG4 424 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 RAB39AQ14964 217 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 CCDC92Q53HC0 331 aaPredicted RBP16.35■□□□□ 0.21
SMN2-202ENST00000380742 SP5Q6BEB4 398 aaPredicted RBP16.35■□□□□ 0.21
SMN2-202ENST00000380742 SHFQ7M4L6 423 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 SSX8Q7RTT4 187 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 CPEB3Q8NE35 698 aaKnown RBP16.35■□□□□ 0.21
SMN2-202ENST00000380742 GJC3Q8NFK1 279 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 OR4F15Q8NGB8 312 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 OR2AJ1Q8NGZ0 328 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 MS4A3Q96HJ5 214 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 MAP6Q96JE9 813 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 SPOCK3Q9BQ16 436 aa16.35■□□□□ 0.21
SMN2-202ENST00000380742 IGHV1-18A0A0C4DH31 117 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 TMCC2O75069 709 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 ZNF14P17017 642 aaPredicted RBP16.34■□□□□ 0.21
SMN2-202ENST00000380742 CRYGSP22914 178 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 PAX7P23759 505 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 ZNF774Q6NX45 483 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 TMEM154Q6P9G4 183 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 DCXRQ7Z4W1 244 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 CDC20BQ86Y33 519 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 FAM169BQ8N8A8 192 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 OR10S1Q8NGN2 331 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 OTOSQ8NHW6 89 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 ST7LQ8TDW4 575 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 FAM222BQ8WU58 562 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 AMELYQ99218 206 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 YIPF3Q9GZM5 350 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 KLHDC2Q9Y2U9 406 aa16.34■□□□□ 0.21
SMN2-202ENST00000380742 RPL36Q9Y3U8 105 aaKnown RBP16.34■□□□□ 0.21
SMN2-202ENST00000380742 ANKHD1Q8IWZ3 2542 aaKnown RBP16.34■□□□□ 0.21
SMN2-202ENST00000380742 USP9YO00507 2555 aaPredicted RBP16.34■□□□□ 0.21
SMN2-202ENST00000380742 RTTNQ86VV8 2226 aa16.33■□□□□ 0.21
SMN2-202ENST00000380742 M0R1B8 84 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 SIAH2O43255 324 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 SGCEO43556 437 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 SERPINA5P05154 406 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 COL8A1P27658 744 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 POU4F2Q12837 409 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 EIF2B1Q14232 305 aaKnown RBP16.33■□□□□ 0.2
SMN2-202ENST00000380742 C6orf141Q5SZD1 244 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 VASH1Q7L8A9 365 aaPredicted RBP16.33■□□□□ 0.2
SMN2-202ENST00000380742 SLC35F2Q8IXU6 374 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 LGALS12Q96DT0 336 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 RHNO1Q9BSD3 238 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 C1orf198Q9H425 327 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 Q9H521 79 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 PNRC2Q9NPJ4 139 aaKnown RBP16.33■□□□□ 0.2
SMN2-202ENST00000380742 MRPS18AQ9NVS2 196 aaKnown RBP16.33■□□□□ 0.2
SMN2-202ENST00000380742 PLEK2Q9NYT0 353 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 UBAP1Q9NZ09 502 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 COPS3Q9UNS2 423 aa16.33■□□□□ 0.2
SMN2-202ENST00000380742 EXOGQ9Y2C4 368 aaKnown RBP16.33■□□□□ 0.2
SMN2-202ENST00000380742 DPRXA6NFQ7 191 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 J3QRE1 110 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 CASKO14936 926 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 SYNGR3O43761 229 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 XPNPEP2O43895 674 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 DOK2O60496 412 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 CECR9P0C854 216 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 ALOX5APP20292 161 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 APEX1P27695 318 aaKnown RBP16.32■□□□□ 0.2
SMN2-202ENST00000380742 ATP6V1E1P36543 226 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 SLC15A1P46059 708 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 RAB35Q15286 201 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 C3orf36Q3SXR2 165 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 RFLNBQ8N5W9 214 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 ZNF454Q8N9F8 522 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 ABHD6Q9BV23 337 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 MOV10Q9HCE1 1003 aaKnown RBP16.32■□□□□ 0.2
SMN2-202ENST00000380742 NGBQ9NPG2 151 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 PLCXD1Q9NUJ7 323 aa16.32■□□□□ 0.2
SMN2-202ENST00000380742 PLEKHB1Q9UF11 243 aaPredicted RBP16.32■□□□□ 0.2
SMN2-202ENST00000380742 SPTAN1Q13813 2472 aaKnown RBP16.31■□□□□ 0.2
SMN2-202ENST00000380742 OR6C6A6NF89 314 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 DEFB108AA8MXU0 73 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 PLP2Q04941 152 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 ELFN2Q5R3F8 820 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 KRT80Q6KB66 452 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 ALDH16A1Q8IZ83 802 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 BPIFB6Q8NFQ5 453 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms