RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 CT45A2Q5DJT8 189 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 VWA2Q5GFL6 755 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 CT45A1Q5HYN5 189 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 RHOUQ7L0Q8 258 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 CT45A3Q8NHU0 189 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 FAM234AQ9H0X4 552 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 EFSO43281 561 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 SULT1C4O75897 302 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 GUSBP08236 651 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 CSF3P09919 207 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 IL3RAP26951 378 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 LAP3P28838 519 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 TPBGQ13641 420 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 KANSL1Q7Z3B3 1105 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 OR13C8Q8NGS7 320 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 OR2A1Q8NGT9 310 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 BCL7CQ8WUZ0 217 aaPredicted RBP14.63□□□□□ -0.07
COL2A1-202ENST00000380518 BTBD17A6NE02 478 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 NRG2O14511 850 aaPredicted RBP14.63□□□□□ -0.07
COL2A1-202ENST00000380518 CCSO14618 274 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 HLA-HP01893 362 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 TPOP07202 933 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 CD1EP15812 388 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 EVX1P49640 407 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 TFAP2EQ6VUC0 442 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 GABRG1Q8N1C3 465 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 OR5M1Q8NGP8 315 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 OR10J5Q8NHC4 309 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 C12orf49Q9H741 205 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 LTB4R2Q9NPC1 389 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 GPR173Q9NS66 373 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 RPH3ALQ9UNE2 315 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 GRPP07492 148 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 NKX2-1P43699 371 aaPredicted RBP14.63□□□□□ -0.07
COL2A1-202ENST00000380518 CAPZBP47756 277 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 CDK5R1Q15078 307 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 TESK1Q15569 626 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 RTL8AQ9BWD3 113 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 ZCCHC4Q9H5U6 513 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 TIMM10BQ9Y5J6 103 aa14.63□□□□□ -0.07
COL2A1-202ENST00000380518 PTAFRP25105 342 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 PSMB3P49720 205 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 TMEM179BQ7Z7N9 219 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 THOC3Q96J01 351 aaKnown RBP14.62□□□□□ -0.07
COL2A1-202ENST00000380518 ZNF416Q9BWM5 594 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 IL21Q9HBE4 155 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 TAF9BQ9HBM6 251 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 PKD1L3Q7Z443 1732 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 LRRC30A6NM36 301 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 IFITM5A6NNB3 132 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 OR2F2O95006 317 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 IGHV3-9P01782 118 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 RPA2P15927 270 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 BTG2P78543 158 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 OR2F1Q13607 317 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 EDDM3AQ14507 147 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 FAM122CQ6P4D5 195 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 SMIM15Q7Z3B0 74 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 CPEB2Q7Z5Q1 589 aaKnown RBP14.62□□□□□ -0.07
COL2A1-202ENST00000380518 OR51B4Q9Y5P0 310 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 F5P12259 2224 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 ZNF891A8MT65 544 aaPredicted RBP14.62□□□□□ -0.07
COL2A1-202ENST00000380518 CCL11P51671 97 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 FABP5Q01469 135 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL2A1-202ENST00000380518 PLXDC2Q6UX71 529 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 YRDCQ86U90 279 aaKnown RBP14.62□□□□□ -0.07
COL2A1-202ENST00000380518 GCNT2Q8N0V5 402 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 SLC35G3Q8N808 338 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 PHF7Q9BWX1 381 aaPredicted RBP14.62□□□□□ -0.07
COL2A1-202ENST00000380518 LANCL2Q9NS86 450 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 SLCO1B1Q9Y6L6 691 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 TMEM235A6NFC5 223 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 FAM166BA8MTA8 275 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 TBXA2RP21731 343 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 HABP2Q14520 560 aaPredicted RBP14.62□□□□□ -0.07
COL2A1-202ENST00000380518 C6orf15Q6UXA7 325 aaPredicted RBP14.62□□□□□ -0.07
COL2A1-202ENST00000380518 CCL4L1Q8NHW4 92 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 HPSE2Q8WWQ2 592 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 MRGPRX1Q96LB2 322 aa14.62□□□□□ -0.07
COL2A1-202ENST00000380518 PATZ1Q9HBE1 687 aaKnown RBP14.62□□□□□ -0.07
COL2A1-202ENST00000380518 FGF20Q9NP95 211 aaPredicted RBP14.62□□□□□ -0.07
COL2A1-202ENST00000380518 HSD17B6O14756 317 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 FAM53BQ14153 422 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 KCNRGQ8N5I3 272 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 C15orf54Q8N8G6 183 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 TSLPQ969D9 159 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 DECR2Q9NUI1 292 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 M0R135 149 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 CXCL10P02778 98 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 NFYBP25208 207 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 OR10K2Q6IF99 312 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 NAA40Q86UY6 237 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 OR51H1Q8NH63 302 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 CNRIP1Q96F85 164 aaPredicted RBP14.61□□□□□ -0.07
COL2A1-202ENST00000380518 ZNF799Q96GE5 643 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 PLK3Q9H4B4 646 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 ERVMER34-1Q9H9K5 563 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 A0A1B0GTL3 188 aa14.61□□□□□ -0.07
COL2A1-202ENST00000380518 PRSS37A4D1T9 235 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms