RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 NAGAP17050 411 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 ALOX5APP20292 161 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 WNT3P56703 355 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 TIAL1Q01085 375 aaKnown RBP eCLIP3.83□□□□□ -1.8
BRCA2-201ENST00000380152 DSC1Q08554 894 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 HLXQ14774 488 aaPredicted RBP3.83□□□□□ -1.8
BRCA2-201ENST00000380152 TMEM64Q6YI46 380 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 GPR137CQ8N3F9 429 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 PLK3Q9H4B4 646 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 C11orf49Q9H6J7 331 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 MBNL1Q9NR56 388 aaKnown RBP3.83□□□□□ -1.8
BRCA2-201ENST00000380152 ASH2LQ9UBL3 628 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 CYB5R1Q9UHQ9 305 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 ZNF346Q9UL40 294 aaKnown RBP3.83□□□□□ -1.8
BRCA2-201ENST00000380152 PLEKHM1Q9Y4G2 1056 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 IDSB3KWA1 339 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 SDCBPO00560 298 aaPredicted RBP3.83□□□□□ -1.8
BRCA2-201ENST00000380152 LILRB5O75023 590 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 IGHA2P01877 340 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 CDONQ4KMG0 1287 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 IGSF11Q5DX21 431 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 MRPL21Q7Z2W9 205 aaKnown RBP3.83□□□□□ -1.8
BRCA2-201ENST00000380152 CAMKMTQ7Z624 323 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 LRRTM1Q86UE6 522 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 FAM24BQ8N5W8 94 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 LSMEM1Q8N8F7 131 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 OR4C16Q8NGL9 310 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 KCNG3Q8TAE7 436 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 MR1Q95460 341 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 WBP2Q969T9 261 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 MRPL38Q96DV4 380 aaKnown RBP3.83□□□□□ -1.8
BRCA2-201ENST00000380152 SLC35A4Q96G79 324 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 RHOFQ9HBH0 211 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 SLC39A9Q9NUM3 307 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 ENTPD2Q9Y5L3 495 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 DENND4AQ7Z401 1863 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 HPNP05981 417 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 BDH1Q02338 343 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 CDK5R1Q15078 307 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 RNF212Q495C1 297 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 TMEM41BQ5BJD5 291 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 CD300LGQ6UXG3 332 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 PRSS35Q8N3Z0 413 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 C19orf47Q8N9M1 422 aaKnown RBP3.83□□□□□ -1.8
BRCA2-201ENST00000380152 OR14L1PQ8NHC6 308 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 MARCH1Q8TCQ1 289 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 FAM3CQ92520 227 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 PSMF1Q92530 271 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 MED18Q9BUE0 208 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 ABHD6Q9BV23 337 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 EPHX3Q9H6B9 360 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 EVA1AQ9H8M9 152 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 TMEM100Q9NV29 134 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 FBXO4Q9UKT5 387 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 TP53TG5Q9Y2B4 290 aa3.83□□□□□ -1.8
BRCA2-201ENST00000380152 ADAM10O14672 748 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 UTS2O95399 124 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 IGHG1P01857 330 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 NQO2P16083 231 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 CSNK1A1P48729 337 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 CDK5Q00535 292 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 B4GALNT1Q00973 533 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 ZNF628Q5EBL2 1059 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 ABI3BPQ7Z7G0 1075 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 RTN4RL1Q86UN2 441 aaPredicted RBP3.82□□□□□ -1.8
BRCA2-201ENST00000380152 DND1Q8IYX4 353 aaKnown RBP3.82□□□□□ -1.8
BRCA2-201ENST00000380152 OR2G3Q8NGZ4 309 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 ADAMTS18Q8TE60 1221 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 ZNF296Q8WUU4 475 aaPredicted RBP3.82□□□□□ -1.8
BRCA2-201ENST00000380152 LCORQ96JN0 433 aaPredicted RBP3.82□□□□□ -1.8
BRCA2-201ENST00000380152 PAPOLGQ9BWT3 736 aaKnown RBP3.82□□□□□ -1.8
BRCA2-201ENST00000380152 MARCH5Q9NX47 278 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 MED16Q9Y2X0 877 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 VWA8A3KMH1 1905 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 AHDC1Q5TGY3 1603 aaPredicted RBP3.82□□□□□ -1.8
BRCA2-201ENST00000380152 TP53I11O14683 189 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 DUX1O43812 170 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 MT-CO2P00403 227 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 H2AFB1P0C5Y9 115 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 SLC2A1P11166 492 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 PXNP49023 591 aaPredicted RBP3.82□□□□□ -1.8
BRCA2-201ENST00000380152 PRAMEF20Q5VT98 475 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 FAM185AQ8N0U4 392 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 OR4D10Q8NGI6 311 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 DCBLD2Q96PD2 775 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 LYSMD1Q96S90 227 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 DUSP22Q9NRW4 184 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 LRIT1Q9P2V4 623 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 OR6C76A6NM76 312 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 RGS13O14921 159 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 GPANK1O95872 356 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 CBX7O95931 251 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 CTSLP07711 333 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 SFTA3P0C7M3 94 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 RPL12P30050 165 aaKnown RBP3.82□□□□□ -1.8
BRCA2-201ENST00000380152 ECI1P42126 302 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 ATP1B3P54709 279 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 SNRPEP62304 92 aaKnown RBP3.82□□□□□ -1.8
BRCA2-201ENST00000380152 TMEM31Q5JXX7 168 aa3.82□□□□□ -1.8
BRCA2-201ENST00000380152 OR2A2Q6IF42 318 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms