RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 OR52M1Q8NGK5 317 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 MIXL1Q9H2W2 232 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 GLTPQ9NZD2 209 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 MRPL15Q9P015 296 aaKnown RBP9.73□□□□□ -0.85
NEDD9-201ENST00000379433 ICAM5Q9UMF0 924 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 B4DXG7 233 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 RGS9O75916 674 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-201ENST00000379433 AHSA1O95433 338 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 IGHA1P01876 353 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 CLEC3BP05452 202 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 MYL9P24844 172 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 PRPS1P60891 318 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 IL24Q13007 206 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 EIF2S3LQ2VIR3 472 aaKnown RBP9.72□□□□□ -0.85
NEDD9-201ENST00000379433 C19orf48Q6RUI8 117 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 OR5T1Q8NG75 326 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 NAT6Q93015 286 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 S100PBPQ96BU1 408 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 GNRHR2Q96P88 292 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 OPA3Q9H6K4 179 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 FKRPQ9H9S5 495 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 CENPMQ9NSP4 180 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 KCNG2Q9UJ96 466 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 FBXL2Q9UKC9 423 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 EXOGQ9Y2C4 368 aaKnown RBP9.72□□□□□ -0.85
NEDD9-201ENST00000379433 D6RAR5 112 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 TSPAN2O60636 221 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 MAS1P04201 325 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 TPOP07202 933 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 RFC3P40938 356 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 DEFA1P59665 94 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 DEFA3P59666 94 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 FOXF1Q12946 379 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 ZNF79Q15937 498 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 C1orf140Q5VVS0 124 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 C6orf15Q6UXA7 325 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-201ENST00000379433 ADGRG3Q86Y34 549 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 UBQLNLQ8IYU4 475 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 TMEM156Q8N614 296 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 LRFN5Q96NI6 719 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 SPSB2Q99619 263 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 ZNF160Q9HCG1 818 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 NCDNQ9UBB6 729 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 MED13Q9UHV7 2174 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 OTOGLQ3ZCN5 2332 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 PTHLHP12272 177 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 IL7P13232 177 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 TRIQKQ629K1 86 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 TRAT1Q6PIZ9 186 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 OVCH1Q7RTY7 1134 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 Q8N402 240 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 DMRTB1Q96MA1 342 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 OR5B2Q96R09 309 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 AMELYQ99218 206 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 SDHCQ99643 169 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-201ENST00000379433 MROQ9BYG7 248 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 SEC61A2Q9H9S3 476 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 POMT1Q9Y6A1 747 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 NBASA2RRP1 2371 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 MUC6Q6W4X9 2439 aa9.72□□□□□ -0.85
NEDD9-201ENST00000379433 IGHV3-15A0A0B4J1V0 119 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 ITGA10O75578 1167 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 KLK2P20151 261 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 SIRPAP78324 504 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 SIGLEC14Q08ET2 396 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 LINC00114Q6XXX2 140 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 SLC16A13Q7RTY0 426 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 CCDC190Q86UF4 302 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 ZNF440Q8IYI8 595 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 FAM169BQ8N8A8 192 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 ZNF485Q8NCK3 441 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 OR10AC1Q8NH08 325 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 NXPE2Q96DL1 559 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 MARS2Q96GW9 593 aaKnown RBP9.71□□□□□ -0.85
NEDD9-201ENST00000379433 TXNDC15Q96J42 360 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 DERL3Q96Q80 235 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 SOX7Q9BT81 388 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 LAT2Q9GZY6 243 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 RNF32Q9H0A6 362 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 ALX4Q9H161 411 aaPredicted RBP9.71□□□□□ -0.85
NEDD9-201ENST00000379433 BOLA1Q9Y3E2 137 aa9.71□□□□□ -0.85
NEDD9-201ENST00000379433 A0A0G2JMP0 313 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 A0A0X1KG70 313 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 RENP00797 406 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 IFNGR1P15260 489 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 LAP3P28838 519 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 MPLP40238 635 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 P2RX1P51575 399 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 NANOS3P60323 173 aaKnown RBP9.71□□□□□ -0.86
NEDD9-201ENST00000379433 MRPL49Q13405 166 aaKnown RBP9.71□□□□□ -0.86
NEDD9-201ENST00000379433 HIKESHIQ53FT3 197 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 FNDC7Q5VTL7 733 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 AGAP7PQ5VUJ5 663 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 RNLSQ5VYX0 342 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 B3GNTL1Q67FW5 361 aaPredicted RBP9.71□□□□□ -0.86
NEDD9-201ENST00000379433 SLITRK4Q8IW52 837 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 C19orf18Q8NEA5 215 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 OR4M2Q8NGB6 313 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 OR51A4Q8NGJ6 313 aa9.71□□□□□ -0.86
NEDD9-201ENST00000379433 HOXB13Q92826 284 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms