RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 ABI3Q9P2A4 366 aa13.13□□□□□ -0.31
RAB3IP-203ENST00000378809 CKLFQ9UBR5 152 aa13.13□□□□□ -0.31
RAB3IP-203ENST00000378809 PCDHGA9Q9Y5G4 932 aaKnown RBP13.13□□□□□ -0.31
RAB3IP-203ENST00000378809 PCSK5Q92824 1860 aa13.13□□□□□ -0.31
RAB3IP-203ENST00000378809 FAM240BA0A1B0GVZ2 78 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 TERTO14746 1132 aaKnown RBP13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 LANCL1O43813 399 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 UBL3O95164 117 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 VAMP5O95183 116 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 CD96P40200 585 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 KIR2DL3P43628 341 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 CSNK1A1P48729 337 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 TPTEP56180 551 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 CSRP2Q16527 193 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 BCL2L15Q5TBC7 163 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 JMJD6Q6NYC1 403 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 SLC25A47Q6Q0C1 308 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 DEGS2Q6QHC5 323 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 PLET1Q6UQ28 207 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 CREB3L2Q70SY1 520 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 SERPINA12Q8IW75 414 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 OR13C3Q8NGS6 347 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 ZNF385AQ96PM9 386 aaKnown RBP13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 SRXN1Q9BYN0 137 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 ASH2LQ9UBL3 628 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 GDF2Q9UK05 429 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 LOC107986453A0A1B0GWG9 222 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 ADRB1P08588 477 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 NR2C1P13056 603 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 HSD11B1P28845 292 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 GUCA1AP43080 201 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 EIF2B2P49770 351 aaKnown RBP13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 B3GALT5-AS1P59052 145 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 TAF13Q15543 124 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 CFAP77Q6ZQR2 320 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 LINC00696Q6ZRV3 163 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 GLCCI1Q86VQ1 547 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 OR9K2Q8NGE7 335 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 SYNPRQ8TBG9 265 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 KCNE4Q8WWG9 221 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 ASB5Q8WWX0 329 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 ZNF775Q96BV0 537 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 UTP23Q9BRU9 249 aaKnown RBP13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 RBFOX1Q9NWB1 397 aaKnown RBP13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 GLTPQ9NZD2 209 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 OR5V1Q9UGF6 321 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 HHLA2Q9UM44 414 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 BOKQ9UMX3 212 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 N6AMT1Q9Y5N5 214 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 LHFPL6Q9Y693 200 aa13.12□□□□□ -0.31
RAB3IP-203ENST00000378809 KMT2EQ8IZD2 1858 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 PINLYPA6NC86 204 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 SRSF10O75494 262 aaKnown RBP13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 CD3GP09693 182 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 CNR1P21554 472 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 RFC3P40938 356 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 NR4A2P43354 598 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 CARD18P57730 90 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 SGCAQ16586 387 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 HIST3H3Q16695 136 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 RSBN1Q5VWQ0 802 aaPredicted RBP13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 ZNF704Q6ZNC4 412 aaPredicted RBP13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 LINGO2Q7L985 606 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 LUZP2Q86TE4 346 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 CLEC1AQ8NC01 280 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 MRI1Q9BV20 369 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 ZFP64Q9NPA5 681 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 G6PC2Q9NQR9 355 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 NLKQ9UBE8 527 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 CAMK2AQ9UQM7 478 aa13.11□□□□□ -0.31
RAB3IP-203ENST00000378809 P2RY10O00398 339 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 CALCBP10092 127 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 POU3F2P20265 443 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 STARP49675 285 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 GABREP78334 506 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 AGAP6Q5VW22 663 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 MTFR2Q6P444 385 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 BAIAP2L2Q6UXY1 529 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 PRSS45Q7RTY3 260 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 PLPP7Q8NBV4 271 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 ADAMTS17Q8TE56 1095 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 TRIM63Q969Q1 353 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 SLC25A38Q96DW6 304 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 AGAP4Q96P64 663 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 SIGLEC12Q96PQ1 595 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 OR2M2Q96R28 347 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 TAS2R4Q9NYW5 299 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 AHCTF1Q8WYP5 2266 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 SPAARA0A1B0GVQ0 90 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 ZNF878C9JN71 531 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 TMEM127O75204 238 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 NEURL1O76050 574 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 UBCP0CG48 685 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 SRP9P49458 86 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 SELENOPP49908 381 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 MMP15P51511 669 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 RAC3P60763 192 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 DGCR2P98153 550 aa13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 AIMP2Q13155 320 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-203ENST00000378809 STPG1Q5TH74 334 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms