RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 OR2AT4A6NND4 320 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 ARPC1BO15143 372 aaKnown RBP12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 SCGB1D2O95969 90 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 ZNF16P17020 682 aaPredicted RBP12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 CDKN2AP42771 156 aaKnown RBP12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 S100A10P60903 97 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 BDH1Q02338 343 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 PLCXD3Q63HM9 321 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 MOB3CQ70IA8 216 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 CCDC71Q8IV32 467 aaPredicted RBP12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 C9orf40Q8IXQ3 194 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 ZNF611Q8N823 705 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 ZBTB8AQ96BR9 441 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 PAPOLGQ9BWT3 736 aaKnown RBP12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 OR51J1Q9H342 316 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 RANBP3Q9H6Z4 567 aaPredicted RBP12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 FBXO4Q9UKT5 387 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 LOC107986453A0A1B0GWG9 222 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 ANKRD30BLA7E2S9 258 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 SGCEO43556 437 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 AVPR2P30518 371 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 DSCR4P56555 118 aaPredicted RBP12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 PPIAP62937 165 aaKnown RBP12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 B3GNTL1Q67FW5 361 aaPredicted RBP12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 TIGD3Q6B0B8 471 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 OR2G2Q8NGZ5 317 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 FAM3DQ96BQ1 224 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 DOK1Q99704 481 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 RAB33BQ9H082 229 aa12.8□□□□□ -0.36
SHROOM1-203ENST00000378679 OR14I1A6ND48 311 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 TNFSF11O14788 317 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 IGKV1D-16P01601 117 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 LIPCP11150 499 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 FCGR2AP12318 317 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 CNN3Q15417 329 aaKnown RBP12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 SWI5Q1ZZU3 235 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 ZADH2Q8N4Q0 377 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 ROBO4Q8WZ75 1007 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 METTL17Q9H7H0 456 aaPredicted RBP12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 EXOSC3Q9NQT5 275 aaKnown RBP12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 SLCO1C1Q9NYB5 712 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 TCFL5Q9UL49 500 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 TBX6O95947 436 aaPredicted RBP12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 APEHP13798 732 aaKnown RBP12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 ZNF93P35789 620 aaPredicted RBP12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 SRP9P49458 86 aaKnown RBP12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 OR10A3P58181 314 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 SSPNQ14714 243 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 DEFB109BQ30KR1 87 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 TMEM81Q6P7N7 255 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 CD163Q86VB7 1156 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 NAXDQ8IW45 347 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 ARL5BQ96KC2 179 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 SELENOIQ9C0D9 397 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 MAN2C1Q9NTJ4 1040 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 A0A0G2JMP0 313 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 NAP1L6A6NFF2 107 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 ZNF254O75437 659 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 SERPINA7P05543 415 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 CSF1P09603 554 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 CD53P19397 219 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 GDNFP39905 211 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 VEGFCP49767 419 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 FMODQ06828 376 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 SLC17A1Q14916 467 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 UBE2NLQ5JXB2 153 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 LYPD4Q6UWN0 246 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 SPERTQ8NA61 448 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 CCDC54Q8NEL0 328 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 OR4M2Q8NGB6 313 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 OR52N5Q8NH56 324 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 TOMM40LQ969M1 308 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 OR2S2Q9NQN1 319 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 HIF3AQ9Y2N7 669 aa12.79□□□□□ -0.36
SHROOM1-203ENST00000378679 A0A1W2PQM1 296 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 ZNF814B7Z6K7 855 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 OIP5O43482 229 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 SFTPBP07988 381 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 PNLIPP16233 465 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 PCMT1P22061 227 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 GCH1P30793 250 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 CCR6P51684 374 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 ATP1B3P54709 279 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 ZNF615Q8N8J6 731 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 ARPC5LQ9BPX5 153 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 TMEM59Q9BXS4 323 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 MED12Q93074 2177 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 DHHO43323 396 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 AKAIN1P0CW23 69 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 P2RX3P56373 397 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 BEX5Q5H9J7 111 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 HAGHLQ6PII5 290 aaPredicted RBP12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 APOOLQ6UXV4 268 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 ATG4DQ86TL0 474 aaPredicted RBP12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 MKXQ8IYA7 352 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 OR5L1Q8NGL2 311 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 OR51E1Q8TCB6 317 aa12.78□□□□□ -0.36
SHROOM1-203ENST00000378679 CLCC1Q96S66 551 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms