RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 DBPQ10586 325 aaPredicted RBP13.08□□□□□ -0.32
TCOF1-202ENST00000377797 OTOSQ8NHW6 89 aa13.08□□□□□ -0.32
TCOF1-202ENST00000377797 ADGRL4Q9HBW9 690 aa13.08□□□□□ -0.32
TCOF1-202ENST00000377797 OIP5O43482 229 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 PRAF2O60831 178 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 ANGPTL5Q86XS5 388 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 PIGTQ969N2 578 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 TSPAN32Q96QS1 320 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 DOK1Q99704 481 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 AICDAQ9GZX7 198 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 COL4A6Q14031 1691 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 LOC100289279A0A1B0GTE1 492 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 EEF1E1-BLOC1S5C9J1V9 151 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 SEMG1P04279 462 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 LIPCP11150 499 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 ZNF35P13682 527 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 GNRHRP30968 328 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 B3GNTL1Q67FW5 361 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-202ENST00000377797 BPIFB2Q8N4F0 458 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 ASCC1Q8N9N2 400 aaKnown RBP13.07□□□□□ -0.32
TCOF1-202ENST00000377797 C11orf40Q8WZ69 217 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 PTP4A1Q93096 173 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 PSD2Q9BQI7 771 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 OR7C1O76099 320 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-202ENST00000377797 PRKACBP22694 351 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 CD34P28906 385 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 TSC2P49815 1807 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 FZD5Q13467 585 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 PLEKHN1Q494U1 663 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-202ENST00000377797 PGAP1Q75T13 922 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 SIAH3Q8IW03 269 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 SPERTQ8NA61 448 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 GALNT11Q8NCW6 608 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 CT55Q8WUE5 264 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 HYLS1Q96M11 299 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 A0A0B4J203 849 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 SLC22A5O76082 557 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 GPANK1O95872 356 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 CRYBB2P43320 205 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 OR1C1Q15619 314 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 DEFB109BQ30KR1 87 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 ZNF684Q5T5D7 378 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 ZNF770Q6IQ21 691 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-202ENST00000377797 OR6V1Q8N148 313 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 OR8B4Q96RC9 309 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 OR2B2Q9GZK3 357 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 METTL9Q9H1A3 318 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 ICAM5Q9UMF0 924 aa13.07□□□□□ -0.32
TCOF1-202ENST00000377797 EXOGQ9Y2C4 368 aaKnown RBP13.07□□□□□ -0.32
TCOF1-202ENST00000377797 MN1Q10571 1320 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-202ENST00000377797 A0A1W2PQM1 296 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 PSMB1P20618 241 aaKnown RBP13.06□□□□□ -0.32
TCOF1-202ENST00000377797 AVPR2P30518 371 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 FGF9P31371 208 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-202ENST00000377797 FXYD4P59646 89 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 INSL4Q14641 139 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 OR2V1Q8NHB1 315 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 PRRT1Q99946 306 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 AKIP1Q9NQ31 210 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 GDF2Q9UK05 429 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-202ENST00000377797 HMX3A6NHT5 357 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 IFITM5A6NNB3 132 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 M0R135 149 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 PRH1P02810 166 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 CDAP32320 146 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 EVX1P49640 407 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 MEF2DQ14814 521 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 WDR88Q6ZMY6 472 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.06□□□□□ -0.32
TCOF1-202ENST00000377797 OR56B1Q8NGI3 324 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 RAB3CQ96E17 227 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 ZNF799Q96GE5 643 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 MED18Q9BUE0 208 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 LANCL2Q9NS86 450 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 SNRPD2P62316 118 aaKnown RBP13.06□□□□□ -0.32
TCOF1-202ENST00000377797 ECH1Q13011 328 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 OR56B4Q8NH76 319 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 ALKBH3Q96Q83 286 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-202ENST00000377797 R4GMQ9 66 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 TRABD2BA6NFA1 517 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 HSPB2A8KAH6 182 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 TNFRSF10AO00220 468 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 PVALBP20472 110 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-202ENST00000377797 RIPPLY1Q0D2K3 151 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 HSPB2Q16082 182 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 ZNF658BQ4V348 819 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-202ENST00000377797 LAIR1Q6GTX8 287 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 DOK3Q7L591 496 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 ADGRE4PQ86SQ3 457 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 COQ8AQ8NI60 647 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 CTHRC1Q96CG8 243 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 ATF6BQ99941 703 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 ARL6Q9H0F7 186 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 GPR84Q9NQS5 396 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 KCNS2Q9ULS6 477 aa13.06□□□□□ -0.32
TCOF1-202ENST00000377797 TCF20Q9UGU0 1960 aaKnown RBP13.05□□□□□ -0.32
TCOF1-202ENST00000377797 AIPO00170 330 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 ZNF44P15621 663 aa13.05□□□□□ -0.32
TCOF1-202ENST00000377797 BLVRBP30043 206 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-202ENST00000377797 Q6ZTK2 550 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms