RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CD14P08571 375 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 MPV17P39210 176 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 HTR5AP47898 357 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 RGS6P49758 472 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 AQP6Q13520 282 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 TMEM155Q4W5P6 130 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 GPR139Q6DWJ6 353 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 SLC27A4Q6P1M0 643 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 PGM2L1Q6PCE3 622 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 MBOAT2Q6ZWT7 520 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 FKBP9P1Q75LS8 142 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 LRRC75AQ8NAA5 344 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 OR51A7Q8NH64 312 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 POP5Q969H6 163 aaKnown RBP12.51□□□□□ -0.41
HDAC6-204ENST00000376643 SAMD8Q96LT4 415 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 DCLRE1CQ96SD1 692 aaKnown RBP12.51□□□□□ -0.41
HDAC6-204ENST00000376643 HOPXQ9BPY8 73 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-204ENST00000376643 DDX28Q9NUL7 540 aaKnown RBP12.51□□□□□ -0.41
HDAC6-204ENST00000376643 UBAP1Q9NZ09 502 aa12.51□□□□□ -0.41
HDAC6-204ENST00000376643 TRAV27A0A087WT01 109 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 IGKV1D-43A0A0B4J1Z2 117 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 ZSCAN5BA6NJL1 495 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 PIP5K1CO60331 668 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 ZNF682O95780 498 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 ADRA2CP18825 462 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 KITLGP21583 273 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 LSM6P62312 80 aaKnown RBP12.5□□□□□ -0.41
HDAC6-204ENST00000376643 CDK5R2Q13319 367 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 ZBED5Q49AG3 693 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 ZNF774Q6NX45 483 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 TMPRSS11FQ6ZWK6 438 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 MUC20Q8N307 709 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-204ENST00000376643 OR5L1Q8NGL2 311 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 ZNF570Q96NI8 536 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 GPA33Q99795 319 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 MRI1Q9BV20 369 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 TMEM106BQ9NUM4 274 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 FGFR1OP2Q9NVK5 253 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 IL19Q9UHD0 177 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 KLHL21Q9UJP4 597 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 RPS6KA6Q9UK32 745 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 FAM32AQ9Y421 112 aaKnown RBP12.5□□□□□ -0.41
HDAC6-204ENST00000376643 ANK2Q01484 3957 aa12.5□□□□□ -0.41
HDAC6-204ENST00000376643 TEX13CA0A0J9YWL9 993 aa12.49□□□□□ -0.41
HDAC6-204ENST00000376643 CXCR6O00574 342 aa12.49□□□□□ -0.41
HDAC6-204ENST00000376643 CCDC22O60826 627 aa12.49□□□□□ -0.41
HDAC6-204ENST00000376643 NDUFB2O95178 105 aa12.49□□□□□ -0.41
HDAC6-204ENST00000376643 GUCY1A3Q02108 690 aa12.49□□□□□ -0.41
HDAC6-204ENST00000376643 ENDOGQ14249 297 aaKnown RBP12.49□□□□□ -0.41
HDAC6-204ENST00000376643 ARMCX4Q5H9R4 360 aa12.49□□□□□ -0.41
HDAC6-204ENST00000376643 DNM1P34Q6PK57 102 aa12.49□□□□□ -0.41
HDAC6-204ENST00000376643 ADCK1Q86TW2 530 aa12.49□□□□□ -0.41
HDAC6-204ENST00000376643 IGFN1Q86VF2 1251 aa12.49□□□□□ -0.41
HDAC6-204ENST00000376643 OR13C2Q8NGS9 318 aa12.49□□□□□ -0.41
HDAC6-204ENST00000376643 GTF3AQ92664 365 aaKnown RBP12.49□□□□□ -0.41
HDAC6-204ENST00000376643 MSL2Q9HCI7 577 aa12.49□□□□□ -0.41
HDAC6-204ENST00000376643 PLEK2Q9NYT0 353 aa12.49□□□□□ -0.41
HDAC6-204ENST00000376643 PURGQ9UJV8 347 aaKnown RBP12.49□□□□□ -0.41
HDAC6-204ENST00000376643 CACNG2Q9Y698 323 aa12.49□□□□□ -0.41
HDAC6-204ENST00000376643 PRSS37A4D1T9 235 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 GMNNO75496 209 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 KHDRBS3O75525 346 aaKnown RBP12.48□□□□□ -0.41
HDAC6-204ENST00000376643 PRSS23O95084 383 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 NGFP01138 241 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 IGHV2-70P01814 119 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 RAC2P15153 192 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 H2AFXP16104 143 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-204ENST00000376643 LCN2P80188 198 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 LIPEQ05469 1076 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 PSG7Q13046 419 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 CBLL1Q75N03 491 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 GLB1L2Q8IW92 636 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 ZNF283Q8N7M2 679 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 OR2Z1Q8NG97 314 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 PTP4A1Q93096 173 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 RCN3Q96D15 328 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 RASD2Q96D21 266 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 EFCAB1Q9HAE3 211 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 OR5V1Q9UGF6 321 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 PPP1R3CQ9UQK1 317 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 POLR1DQ9Y2S0 133 aa12.48□□□□□ -0.41
HDAC6-204ENST00000376643 POLR3KQ9Y2Y1 108 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-204ENST00000376643 A0A087WUU8 490 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 A0A1W2PRQ8 180 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 OR6C6A6NF89 314 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 SPRY1O43609 319 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-204ENST00000376643 SBK2P0C263 348 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 CRABP1P29762 137 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 SDHAP31040 664 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 MDH2P40926 338 aaKnown RBP12.47□□□□□ -0.41
HDAC6-204ENST00000376643 YAP1P46937 504 aaKnown RBP12.47□□□□□ -0.41
HDAC6-204ENST00000376643 RPS6KA3P51812 740 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 BTG1P62324 171 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 FOXL1Q12952 345 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 KRR1Q13601 381 aaKnown RBP12.47□□□□□ -0.41
HDAC6-204ENST00000376643 DGCR6Q14129 220 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 ESCO2Q56NI9 601 aa12.47□□□□□ -0.41
HDAC6-204ENST00000376643 C1orf229Q6ZS94 237 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-204ENST00000376643 VASH1Q7L8A9 365 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-204ENST00000376643 VTCN1Q7Z7D3 282 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms