RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 STPG2Q8N412 459 aa12.99□□□□□ -0.33
TNFRSF1B-201ENST00000376259 PHB2Q99623 299 aa12.99□□□□□ -0.33
TNFRSF1B-201ENST00000376259 TIMP4Q99727 224 aa12.99□□□□□ -0.33
TNFRSF1B-201ENST00000376259 PCDHB16Q9NRJ7 776 aa12.99□□□□□ -0.33
TNFRSF1B-201ENST00000376259 SUSD2Q9UGT4 822 aa12.99□□□□□ -0.33
TNFRSF1B-201ENST00000376259 CACNA1DQ01668 2161 aa12.99□□□□□ -0.33
TNFRSF1B-201ENST00000376259 PHF3Q92576 2039 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 DENND4CQ5VZ89 1909 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 DOCK7Q96N67 2140 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 A0A0A6YYH2 397 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 A6NJ64 397 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 M0R036 132 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 STK17BO94768 372 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 CD53P19397 219 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 CDAP32320 146 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 UBE2IP63279 158 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ZNF117Q03924 483 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 SERTAD2Q14140 314 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 PAPD4Q6PIY7 484 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 SPAG16Q8N0X2 631 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 LRRC18Q8N456 261 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 MBD2Q9UBB5 411 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 SERTAD3Q9UJW9 196 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 EP300Q09472 2414 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 TEX51A0A1B0GUA7 166 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 TGFBR3LH3BV60 316 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ZNF208O43345 1280 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 XRCC3O43542 346 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 F12P00748 615 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 SERPINA2P20848 420 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 HRH1P35367 487 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 RPS11P62280 158 aaKnown RBP eCLIP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 MFGE8Q08431 387 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ZNF616Q08AN1 781 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 C19orf57Q0VDD7 668 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 FZD5Q13467 585 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 SLC17A1Q14916 467 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 TMEM200AQ86VY9 491 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ZNF764Q96H86 408 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 CST11Q9H112 138 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 GPN3Q9UHW5 284 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 OR52A1Q9UKL2 312 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 LSM5Q9Y4Y9 91 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 MED19A0JLT2 244 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 H7C417 338 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 PNPP00491 289 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ERCC1P07992 297 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 CSNK2A1P68400 391 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 SLC35D3Q5M8T2 416 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 C1orf140Q5VVS0 124 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 FBXO46Q6PJ61 603 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 DNM1P34Q6PK57 102 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 FJX1Q86VR8 437 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 CSNK2A3Q8NEV1 391 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 MARCH1Q8TCQ1 289 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 C4orf45Q96LM5 186 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 JAM3Q9BX67 310 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 PARPBPQ9NWS1 579 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 MTFP1Q9UDX5 166 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 OPN4Q9UHM6 478 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 HRH3Q9Y5N1 445 aa12.98□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ESPL1Q14674 2120 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 NME2P22392 152 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 GABRR1P24046 479 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ATP1B3P54709 279 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 GKN2Q86XP6 184 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 OR51E1Q8TCB6 317 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ZDHHC12Q96GR4 267 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 SDHAF3Q9NRP4 125 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 OR4C45A6NMZ5 311 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 TGM6O95932 706 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 HEXBP07686 556 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 CBR1P16152 277 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ALOX5APP20292 161 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 RBM39Q14498 530 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ZNF626Q68DY1 528 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 FAM57BQ71RH2 274 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 OR4K17Q8NGC6 315 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 NUDT9Q9BW91 350 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 PPP4R1LQ9P1A2 415 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 LRP12Q9Y561 859 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 TMEM272A0A1B0GTI8 110 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 SERPINA5P05154 406 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 AGTR1P30556 359 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ZNF41P51814 821 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 PHF19Q5T6S3 580 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 SLC51BQ86UW2 128 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ZNF679Q8IYX0 411 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 OR5T2Q8NGG2 359 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 STK35Q8TDR2 534 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 FOXRED1Q96CU9 486 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ARL5BQ96KC2 179 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 GAS2L1Q99501 681 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 SLX1AQ9BQ83 275 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 RBM24Q9BX46 236 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 DZANK1Q9NVP4 752 aa12.97□□□□□ -0.33
TNFRSF1B-201ENST00000376259 PRSS37A4D1T9 235 aa12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 CCDC85CA6NKD9 419 aa12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 VSTM2BA6NLU5 285 aa12.96□□□□□ -0.33
TNFRSF1B-201ENST00000376259 ARPC3O15145 178 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms