RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 GYPBP06028 91 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 ANXA8P13928 327 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 CCNOP22674 350 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 FASP25445 335 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 POU1F1P28069 291 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 GRK5P34947 590 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 APLNRP35414 380 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 GGT2P36268 569 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 GUCA1AP43080 201 aaPredicted RBP13.73□□□□□ -0.21
C11orf88-202ENST00000375618 PCBD1P61457 104 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 HIST1H3AP68431 136 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 CDK5Q00535 292 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 AQP6Q13520 282 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 GINS1Q14691 196 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 HIST2H3PS2Q5TEC6 136 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 TMEM236Q5W0B7 351 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 DNM1P34Q6PK57 102 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 DNM1P46Q6ZS02 220 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 RFPL4BQ6ZWI9 263 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 HIST2H3AQ71DI3 136 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 LINC00346Q8IVM7 164 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 ZCCHC24Q8N2G6 241 aaKnown RBP13.73□□□□□ -0.21
C11orf88-202ENST00000375618 ATG16L2Q8NAA4 619 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 TEX47Q8TBZ9 253 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 TRMT61AQ96FX7 289 aaKnown RBP13.73□□□□□ -0.21
C11orf88-202ENST00000375618 SORCS2Q96PQ0 1159 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 SEMA6AQ9H2E6 1030 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 C1orf198Q9H425 327 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 CMC2Q9NRP2 79 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 BAIAP2Q9UQB8 552 aa13.73□□□□□ -0.21
C11orf88-202ENST00000375618 FAM183AA6NL82 134 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 SGCEO43556 437 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 SYNGR3O43761 229 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 DOK2O60496 412 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 CLPTM1O96005 669 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 NGFP01138 241 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 PTHP01270 115 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 RPS27P42677 84 aaKnown RBP13.72□□□□□ -0.21
C11orf88-202ENST00000375618 GDI2P50395 445 aaKnown RBP13.72□□□□□ -0.21
C11orf88-202ENST00000375618 UCP2P55851 309 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 GALK2Q01415 458 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 TEKQ02763 1124 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 MAD2L1BPQ15013 274 aaPredicted RBP13.72□□□□□ -0.21
C11orf88-202ENST00000375618 SLC18B1Q6NT16 456 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 CFAP77Q6ZQR2 320 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 OR1J2Q8NGS2 313 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 PKP2Q99959 881 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 GABARAPL1Q9H0R8 117 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 KLHL21Q9UJP4 597 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 CMAHPQ9Y471 501 aa13.72□□□□□ -0.21
C11orf88-202ENST00000375618 OR6C6A6NF89 314 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 SSX4O60224 188 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 DBHP09172 617 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 COX5BP10606 129 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 CD99P14209 185 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 SPI1P17947 270 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 PCSK6P29122 969 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 EPHA2P29317 976 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 HTR5AP47898 357 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 SLC25A1P53007 311 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 SNRPD2P62316 118 aaKnown RBP13.71□□□□□ -0.21
C11orf88-202ENST00000375618 GLO1Q04760 184 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 SCRN3Q0VDG4 424 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 RSPO1Q2MKA7 263 aaPredicted RBP13.71□□□□□ -0.21
C11orf88-202ENST00000375618 SPATA46Q5T0L3 261 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 LINC01590Q5TEZ4 76 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 SLC27A4Q6P1M0 643 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 ZNF511Q8NB15 262 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 PROKR2Q8NFJ6 384 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 OR10S1Q8NGN2 331 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 PTP4A1Q93096 173 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 WACQ9BTA9 647 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 BDH2Q9BUT1 245 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 POFUT1Q9H488 388 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 WDR76Q9H967 626 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 ZNF556Q9HAH1 456 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 PNRC2Q9NPJ4 139 aaKnown RBP13.71□□□□□ -0.21
C11orf88-202ENST00000375618 PAPOLBQ9NRJ5 636 aaKnown RBP13.71□□□□□ -0.21
C11orf88-202ENST00000375618 TMEFF2Q9UIK5 374 aaPredicted RBP13.71□□□□□ -0.21
C11orf88-202ENST00000375618 POLR1DQ9Y2S0 133 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 SPEF1Q9Y4P9 236 aa13.71□□□□□ -0.21
C11orf88-202ENST00000375618 MAP1AP78559 2803 aaPredicted RBP13.7□□□□□ -0.22
C11orf88-202ENST00000375618 RIIAD1A6NNX1 92 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 G3V2T6 193 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 SURF4O15260 269 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 ICMTO60725 284 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 ZNF23P17027 643 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 MPV17P39210 176 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 ALDH3B1P43353 468 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 PPOXP50336 477 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 TNK1Q13470 666 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 CLEC12BQ2HXU8 276 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 KDM4DQ6B0I6 523 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 RGS7BPQ6MZT1 257 aaPredicted RBP13.7□□□□□ -0.22
C11orf88-202ENST00000375618 HIPK1Q86Z02 1210 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 ALDH16A1Q8IZ83 802 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 ICA1LQ8NDH6 482 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 OR1J1Q8NGS3 322 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 OR2T4Q8NH00 348 aa13.7□□□□□ -0.22
C11orf88-202ENST00000375618 OR1F12Q8NHA8 337 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms