RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 RBPJQ06330 500 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 RIPPLY1Q0D2K3 151 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 OR6M1Q8NGM8 313 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 ZPBPQ9BS86 351 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 FGF20Q9NP95 211 aaPredicted RBP16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 ENY2Q9NPA8 101 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 LHX9Q9NQ69 397 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 IGHV5-10-1A0A0J9YXX1 117 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 ANKUB1A6NFN9 424 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 M0R135 149 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 TSPAN4O14817 238 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 GAAP10253 952 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 RBM39Q14498 530 aaKnown RBP16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 OR2G2Q8NGZ5 317 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 ZNF799Q96GE5 643 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 GPR173Q9NS66 373 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 STEAP1Q9UHE8 339 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 HLA-AP01891 365 aaKnown RBP16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 CAV2P51636 162 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 XAF1Q6GPH4 301 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 OR56B1Q8NGI3 324 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 OR4K15Q8NH41 348 aa16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 CCDC163A0A0D9SF12 145 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 TTLL8A6PVC2 850 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 H3BUI4 141 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 DHHO43323 396 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 SERPINE2P07093 398 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 GAB4Q2WGN9 574 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 KANSL1Q7Z3B3 1105 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 OR11G2Q8NGC1 345 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 STK35Q8TDR2 534 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 CHPT1Q8WUD6 406 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 SNAPC3Q92966 411 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 ZBTB8AQ96BR9 441 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 RANGRFQ9HD47 186 aaPredicted RBP16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 HDGFL3Q9Y3E1 203 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 COL6A6A6NMZ7 2263 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 ITGB2P05107 769 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 PRKACBP22694 351 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 MAGEB1P43366 347 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 CSRP3P50461 194 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 CLN3Q13286 438 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 OR1C1Q15619 314 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 DGAT2L6Q6ZPD8 337 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 SULF2Q8IWU5 870 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 CMTM1Q8IZ96 169 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 SYS1Q8N2H4 156 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 DEDD2Q8WXF8 326 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 YIPF6Q96EC8 236 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 TRIB1Q96RU8 372 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 NICN1Q9BSH3 213 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 DYNLRB1Q9NP97 96 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 FLRT3Q9NZU0 649 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 TRABD2BA6NFA1 517 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 RAC2P15153 192 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 PTPN6P29350 595 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 RGS19P49795 217 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 WDR74Q6RFH5 385 aaPredicted RBP16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 GIMAP1Q8WWP7 306 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 PHYHIPQ92561 330 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 CES1P1Q9UKY3 287 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 GRB2P62993 217 aaKnown RBP16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 DMWDQ09019 674 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 SLC17A1Q14916 467 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 OR5M9Q8NGP3 310 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 PPP1R35Q8TAP8 253 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 SEC22AQ96IW7 307 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 DERL3Q96Q80 235 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 OR2B2Q9GZK3 357 aa16.22■□□□□ 0.19
PTPDC1-202ENST00000375360 SLC34A2O95436 690 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 GRPP07492 148 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 CTF1Q16619 201 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 PMS2CLQ68D20 193 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 OR52N5Q8NH56 324 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 A0A1B0GTH9 108 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 LIMS3P0CW19 117 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 LIMS4P0CW20 117 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 CT45A8P0DMV1 189 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 CT45A9P0DMV2 189 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 SSTR2P30874 369 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 CDKN2AP42771 156 aaKnown RBP16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 ZFP36L2P47974 494 aaKnown RBP16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 SLC37A1P57057 533 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 PMPCAQ10713 525 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 PRSS53Q2L4Q9 553 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 CT45A2Q5DJT8 189 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 KIF18BQ86Y91 864 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 C12orf45Q8N5I9 185 aaPredicted RBP16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 AKR7LQ8NHP1 331 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 PTPMT1Q8WUK0 201 aaPredicted RBP16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 SPAARA0A1B0GVQ0 90 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 FZD5Q13467 585 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 MEF2DQ14814 521 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 CEACAM16Q2WEN9 425 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 DRAXINQ8NBI3 349 aaPredicted RBP16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 C11orf40Q8WZ69 217 aa16.21■□□□□ 0.19
PTPDC1-202ENST00000375360 RGPD3A6NKT7 1758 aaPredicted RBP16.21■□□□□ 0.18
PTPDC1-202ENST00000375360 BEX5Q5H9J7 111 aa16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 GCDHQ92947 438 aaPredicted RBP16.2■□□□□ 0.18
PTPDC1-202ENST00000375360 FCRL1Q96LA6 429 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms