RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 Q8N402 240 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 FRMD1Q8N878 549 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 CYB561A3Q8NBI2 242 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 C19orf18Q8NEA5 215 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 SDR9C7Q8NEX9 313 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 OR52N4Q8NGI2 321 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 OR52E2Q8NGJ4 325 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 OR5J2Q8NH18 312 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 OR51Q1Q8NH59 317 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 HAVCR2Q8TDQ0 301 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 LMX1AQ8TE12 382 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 SLC7A6Q92536 515 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 PHYHIPQ92561 330 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 SMIM19Q96E16 107 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 MMABQ96EY8 250 aaPredicted RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 ZNF486Q96H40 463 aaPredicted RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 THOC3Q96J01 351 aaKnown RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 ST6GAL2Q96JF0 529 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 C4orf36Q96KX1 117 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 CMTM3Q96MX0 182 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 ERMAPQ96PL5 475 aaPredicted RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 OR1F2PQ96R84 312 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 TBX5Q99593 518 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 TRAF4Q9BUZ4 470 aaPredicted RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 OR2B2Q9GZK3 357 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 NDEL1Q9GZM8 345 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 RNF121Q9H920 327 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 CHODLQ9H9P2 273 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 NEK6Q9HC98 313 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 B3GAT2Q9NPZ5 323 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 UBQLN4Q9NRR5 601 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 CYSLTR2Q9NS75 346 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 TAS2R10Q9NYW0 307 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 ABRACLQ9P1F3 81 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 RABL2AQ9UBK7 228 aaPredicted RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 EXTL2Q9UBQ6 330 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 GMEB2Q9UKD1 530 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 NDRG2Q9UN36 371 aaKnown RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 RABL2BQ9UNT1 228 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 OR10H1Q9Y4A9 318 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 SLCO1B1Q9Y6L6 691 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 SEC16AO15027 2179 aa4.28□□□□□ -1.72
USP48-202ENST00000374730 TNRC6BQ9UPQ9 1833 aaKnown RBP4.28□□□□□ -1.72
USP48-202ENST00000374730 LAMA1P25391 3075 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 GON4LQ3T8J9 2241 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 A0A0B4J293 547 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 IGHV5-51A0A0C4DH38 117 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 A0A1W2PQD3 144 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 hCG_1807616A0A1W2PRN6 198 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 FAM172BPA6NC97 362 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 FAM90A20PA6NIJ5 464 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 HSPB2A8KAH6 182 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 C17orf105B2RV13 164 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 J3QLW9 94 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 TO15178 435 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 ZNF264O43296 627 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 LYRM1O43325 122 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 CDC123O75794 336 aaPredicted RBP4.27□□□□□ -1.73
USP48-202ENST00000374730 ARL6IP5O75915 188 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 GLCEO94923 617 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 IGKV3-11P04433 115 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 IFNA16P05015 189 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 GYPBP06028 91 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 CD14P08571 375 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 UCHL1P09936 223 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 RFPL3SP0C7P2 107 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 CLUP10909 449 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 ZNF19P17023 458 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 SPI1P17947 270 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 ELK1P19419 428 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 RAB3BP20337 219 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 MAOAP21397 527 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 CD1CP29017 333 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 SHC1P29353 583 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 PYCR1P32322 319 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 RORAP35398 523 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 RPL4P36578 427 aaKnown RBP4.27□□□□□ -1.73
USP48-202ENST00000374730 TALDO1P37837 337 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 CDKN2AP42771 156 aaKnown RBP4.27□□□□□ -1.73
USP48-202ENST00000374730 SLC6A8P48029 635 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 GDI2P50395 445 aaKnown RBP4.27□□□□□ -1.73
USP48-202ENST00000374730 SLC37A1P57057 533 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 OR12D2P58182 307 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 HNRNPKP61978 463 aaKnown RBP eCLIP4.27□□□□□ -1.73
USP48-202ENST00000374730 BTG1P62324 171 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 CSTF1Q05048 431 aaKnown RBP4.27□□□□□ -1.73
USP48-202ENST00000374730 SLC3A1Q07837 685 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 MRPL28Q13084 256 aaKnown RBP4.27□□□□□ -1.73
USP48-202ENST00000374730 PON3Q15166 354 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 HSPB2Q16082 182 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 CARTPTQ16568 116 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 ZNF74Q16587 644 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 NDUFA5Q16718 116 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 NDUFAF6Q330K2 333 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 ZFP69Q49AA0 526 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 ACSM3Q53FZ2 586 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 IDNKQ5T6J7 187 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 LINC01590Q5TEZ4 76 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 TIGD3Q6B0B8 471 aa4.27□□□□□ -1.73
USP48-202ENST00000374730 PYHIN1Q6K0P9 492 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms