RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 NUDT15Q9NV35 164 aa18.25■□□□□ 0.51
SYNC-201ENST00000373484 SCP2D1Q9UJQ7 156 aa18.25■□□□□ 0.51
SYNC-201ENST00000373484 CAMK2AQ9UQM7 478 aa18.25■□□□□ 0.51
SYNC-201ENST00000373484 MEMO1Q9Y316 297 aa18.25■□□□□ 0.51
SYNC-201ENST00000373484 KIAA1549Q9HCM3 1950 aa18.25■□□□□ 0.51
SYNC-201ENST00000373484 E9PLN8 166 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 EEF1E1O43324 174 aaKnown RBP18.24■□□□□ 0.51
SYNC-201ENST00000373484 PRAF2O60831 178 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 POU3F2P20265 443 aaPredicted RBP18.24■□□□□ 0.51
SYNC-201ENST00000373484 SHC1P29353 583 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 GPR4P46093 362 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 DLX5P56178 289 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 MADCAM1Q13477 382 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 INSL4Q14641 139 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 RANBP3LQ86VV4 465 aaPredicted RBP18.24■□□□□ 0.51
SYNC-201ENST00000373484 TOMM5Q8N4H5 51 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 TRMT10AQ8TBZ6 339 aaKnown RBP18.24■□□□□ 0.51
SYNC-201ENST00000373484 TMEM234Q8WY98 164 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 PHYHIPQ92561 330 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 YIPF5Q969M3 257 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 HS6ST2Q96MM7 605 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 ABHD1Q96SE0 405 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 VKORC1Q9BQB6 163 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 PPIL3Q9H2H8 161 aaKnown RBP18.24■□□□□ 0.51
SYNC-201ENST00000373484 SIRT4Q9Y6E7 314 aaPredicted RBP18.24■□□□□ 0.51
SYNC-201ENST00000373484 PCNX1Q96RV3 2341 aa18.24■□□□□ 0.51
SYNC-201ENST00000373484 TRAPPC13A5PLN9 417 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 AHRRA9YTQ3 701 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 TPD52L2O43399 206 aaKnown RBP18.23■□□□□ 0.51
SYNC-201ENST00000373484 THY1P04216 161 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 GKN3PP0CG01 181 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 BAMBIQ13145 260 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 RTL6Q6ICC9 239 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 KISS1RQ969F8 398 aaPredicted RBP18.23■□□□□ 0.51
SYNC-201ENST00000373484 DMRTA2Q96SC8 542 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 CACNG6Q9BXT2 260 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 CLEC4MQ9H2X3 399 aaPredicted RBP18.23■□□□□ 0.51
SYNC-201ENST00000373484 OR52D1Q9H346 318 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 ALKBH4Q9NXW9 302 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 FAM215AQ9Y5M1 114 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 LRRN3E7EW58 273 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 HOXD4P09016 255 aaPredicted RBP18.23■□□□□ 0.51
SYNC-201ENST00000373484 PTGER4P35408 488 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 ACAA2P42765 397 aaKnown RBP18.23■□□□□ 0.51
SYNC-201ENST00000373484 GRK1Q15835 563 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 DMKNQ6E0U4 476 aaPredicted RBP18.23■□□□□ 0.51
SYNC-201ENST00000373484 PLBD1Q6P4A8 553 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 ZNF550Q7Z398 422 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 MEX3DQ86XN8 651 aaKnown RBP18.23■□□□□ 0.51
SYNC-201ENST00000373484 ZNF563Q8TA94 476 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 C12orf10Q9HB07 376 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 ZNF222Q9UK12 451 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 FKBP7Q9Y680 259 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 USP9XQ93008 2570 aaPredicted RBP18.23■□□□□ 0.51
SYNC-201ENST00000373484 DOCK7Q96N67 2140 aa18.23■□□□□ 0.51
SYNC-201ENST00000373484 RAB3BP20337 219 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 RAC1P63000 192 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 SRYQ05066 204 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 CAMK2DQ13557 499 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 GSG1Q2KHT4 349 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 FAM69AQ5T7M9 428 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 C1orf185Q5T7R7 199 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 TMPRSS11FQ6ZWK6 438 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 CEACAM19Q7Z692 300 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 RPRMLQ8N4K4 120 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 TMEM99Q8N816 258 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 FANK1Q8TC84 345 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 ZPLD1Q8TCW7 415 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 TMEM255BQ8WV15 326 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 MAP6Q96JE9 813 aa18.22■□□□□ 0.51
SYNC-201ENST00000373484 MPDZO75970 2070 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 EFNA2O43921 213 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 GATBO75879 557 aaKnown RBP18.21■□□□□ 0.51
SYNC-201ENST00000373484 ARL6IP5O75915 188 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 AGFG2O95081 481 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 SLC2A10O95528 541 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 H2AFB2P0C5Z0 115 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 IL11P20809 199 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 SUCLG1P53597 346 aaKnown RBP18.21■□□□□ 0.51
SYNC-201ENST00000373484 CLDN15P56746 228 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 ACSF3Q4G176 576 aaPredicted RBP18.21■□□□□ 0.51
SYNC-201ENST00000373484 MTFR2Q6P444 385 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 KRT74Q7RTS7 529 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 GGNQ86UU5 652 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 SMPDL3BQ92485 455 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 HSD17B8Q92506 261 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 CCDC120Q96HB5 630 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 PLEKHA1Q9HB21 404 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 SPEF1Q9Y4P9 236 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 NAP1L6A6NFF2 107 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 PRR23D1E9PI22 279 aaPredicted RBP18.21■□□□□ 0.51
SYNC-201ENST00000373484 CDC42EP2O14613 210 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 GPR171O14626 319 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 FRS3O43559 492 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 SBK2P0C263 348 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 PRR23D2P0DMB1 279 aaPredicted RBP18.21■□□□□ 0.51
SYNC-201ENST00000373484 GP1BBP13224 206 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 PRG2P13727 222 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 ZNF136P52737 540 aa18.21■□□□□ 0.51
SYNC-201ENST00000373484 ARL9Q6T311 187 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms