RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 SLC9A3R2Q15599 337 aa11□□□□□ -0.65
TRAPPC3-201ENST00000373159 ALG10Q5BKT4 473 aa11□□□□□ -0.65
TRAPPC3-201ENST00000373159 C9orf139Q6ZV77 190 aa11□□□□□ -0.65
TRAPPC3-201ENST00000373159 STON2Q8WXE9 905 aa11□□□□□ -0.65
TRAPPC3-201ENST00000373159 SIGLEC11Q96RL6 698 aa11□□□□□ -0.65
TRAPPC3-201ENST00000373159 MS4A7Q9GZW8 240 aaPredicted RBP11□□□□□ -0.65
TRAPPC3-201ENST00000373159 IL20RAQ9UHF4 553 aa11□□□□□ -0.65
TRAPPC3-201ENST00000373159 BAG5Q9UL15 447 aa11□□□□□ -0.65
TRAPPC3-201ENST00000373159 PPP1R3CQ9UQK1 317 aa11□□□□□ -0.65
TRAPPC3-201ENST00000373159 MED31Q9Y3C7 131 aa11□□□□□ -0.65
TRAPPC3-201ENST00000373159 VWFP04275 2813 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 C12orf71A8MTZ7 269 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 SURF4O15260 269 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 WNT2P09544 360 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 MDH2P40926 338 aaKnown RBP10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 MTNR1AP48039 350 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 PAX2Q02962 417 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 NFYCQ13952 458 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 ENDOGQ14249 297 aaKnown RBP10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 OCLNQ16625 522 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 ESCO2Q56NI9 601 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 FAM205BPQ63HN1 556 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 LEG1Q6P5S2 330 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 Q6ZR03 302 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 CLDN22Q8N7P3 220 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 LRRC75AQ8NAA5 344 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 NPEPL1Q8NDH3 523 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 OR2Z1Q8NG97 314 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 OR52E2Q8NGJ4 325 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 HAVCR1Q96D42 359 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 CMBLQ96DG6 245 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 OR5V1Q9UGF6 321 aa10.99□□□□□ -0.65
TRAPPC3-201ENST00000373159 A6NIZ1 184 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 TMEM178BH3BS89 294 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 IFNL4K9M1U5 179 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 ABHD16AO95870 558 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 SCG5P05408 212 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 IGHV4-38-2P0DP08 117 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 TNFRSF1BP20333 461 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 MSR1P21757 451 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 RBMXP38159 391 aaKnown RBP10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 CTXN1P60606 82 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 RAP1BP61224 184 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 RAP1AP62834 184 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 TOP3AQ13472 1001 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 AGBL2Q5U5Z8 902 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 NANOGP8Q6NSW7 305 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 C16orf87Q6PH81 154 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 LRRN1Q6UXK5 716 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 CALHM3Q86XJ0 350 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 MUC20Q8N307 709 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 ITLN1Q8WWA0 313 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 UPRTQ96BW1 309 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 BPIFA2Q96DR5 249 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 SH3GL1Q99961 368 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 POFUT1Q9H488 388 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 POLE4Q9NR33 117 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 LRCH1Q9Y2L9 728 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 STARD10Q9Y365 291 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 MMP24Q9Y5R2 645 aa10.98□□□□□ -0.65
TRAPPC3-201ENST00000373159 PRKDCP78527 4128 aaKnown RBP10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 A0A1W2PPL8 197 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 CEACAM18A8MTB9 384 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 SHOX2O60902 331 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 PLATP00750 562 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 IFNA14P01570 189 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 OR1E2P47887 323 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 SCRN3Q0VDG4 424 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 CYLC2Q14093 348 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 ANKDD1AQ495B1 522 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 BEND6Q5SZJ8 279 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 BTNL3Q6UXE8 466 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 PARP8Q8N3A8 854 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 PTP4A1Q93096 173 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 DACT3Q96B18 629 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 TMIGD2Q96BF3 282 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 THOC1Q96FV9 657 aaKnown RBP10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 COG8Q96MW5 612 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 OR2V2Q96R30 315 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 PRDM13Q9H4Q3 707 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 TMEM165Q9HC07 324 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 GCM1Q9NP62 436 aa10.97□□□□□ -0.65
TRAPPC3-201ENST00000373159 TANC2Q9HCD6 1990 aa10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 A0A1B0GUS0 222 aa10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 FSTL3O95633 263 aa10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 IFI30P13284 250 aa10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 RAC2P15153 192 aa10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 MDKP21741 143 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 ST3GAL3Q11203 375 aa10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 FHL1Q13642 323 aa10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 SLC27A4Q6P1M0 643 aa10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 RAB40AQ8WXH6 277 aa10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 TAF15Q92804 592 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 ECSITQ9BQ95 431 aa10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 SSBP3Q9BWW4 388 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 A4GNTQ9UNA3 340 aa10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 SOX21Q9Y651 276 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC3-201ENST00000373159 IGHV3OR16-10A0A075B7F0 116 aa10.95□□□□□ -0.66
TRAPPC3-201ENST00000373159 IGHV2-70DA0A0C4DH43 119 aa10.95□□□□□ -0.66
TRAPPC3-201ENST00000373159 KIR2DS1A0A191URI9 304 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms