RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 MYEOVQ96EZ4 313 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 PHF7Q9BWX1 381 aaPredicted RBP10.43□□□□□ -0.74
PTPRF-203ENST00000372407 OCEL1Q9H607 264 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 AKIP1Q9NQ31 210 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 TMEM235A6NFC5 223 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 CCSO14618 274 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 CSF3P09919 207 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 THBS3P49746 956 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 HSF1Q00613 529 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 OR2A1Q8NGT9 310 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 BAHD1Q8TBE0 780 aaPredicted RBP10.43□□□□□ -0.74
PTPRF-203ENST00000372407 POFUT1Q9H488 388 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 PIGLQ9Y2B2 252 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 PRELID3BQ9Y3B1 194 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 H0Y8X5 98 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 GLSO94925 669 aaPredicted RBP10.43□□□□□ -0.74
PTPRF-203ENST00000372407 DEFA6Q01524 100 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 TAGLNQ01995 201 aaKnown RBP10.43□□□□□ -0.74
PTPRF-203ENST00000372407 GABRG1Q8N1C3 465 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 OR2L13Q8N349 312 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 KCNRGQ8N5I3 272 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 SUMF1Q8NBK3 374 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 SEMA6DQ8NFY4 1073 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 OR11L1Q8NGX0 322 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 OR6K3Q8NGY3 331 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 PLEKHF2Q9H8W4 249 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 GFOD1Q9NXC2 390 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 TAS2R4Q9NYW5 299 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 TIMM8AO60220 97 aaPredicted RBP10.43□□□□□ -0.74
PTPRF-203ENST00000372407 SCAF4O95104 1147 aaKnown RBP10.43□□□□□ -0.74
PTPRF-203ENST00000372407 HPNP05981 417 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 ST6GAL1P15907 406 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 ALOX5APP20292 161 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 SMAD4Q13485 552 aaKnown RBP10.43□□□□□ -0.74
PTPRF-203ENST00000372407 DOC2BQ14184 412 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 PATE1Q8WXA2 126 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 CNRIP1Q96F85 164 aaPredicted RBP10.43□□□□□ -0.74
PTPRF-203ENST00000372407 MED18Q9BUE0 208 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 ARV1Q9H2C2 271 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 HRASLSQ9HDD0 168 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 CHST11Q9NPF2 352 aa10.43□□□□□ -0.74
PTPRF-203ENST00000372407 HEYLQ9NQ87 328 aaPredicted RBP10.43□□□□□ -0.74
PTPRF-203ENST00000372407 EXOSC3Q9NQT5 275 aaKnown RBP10.43□□□□□ -0.74
PTPRF-203ENST00000372407 ZNF346Q9UL40 294 aaKnown RBP10.43□□□□□ -0.74
PTPRF-203ENST00000372407 ANKRD61A6NGH8 418 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 PRR35P0CG20 571 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 RAB4AP20338 218 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 RRADP55042 308 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 SNTB1Q13884 538 aaKnown RBP10.42□□□□□ -0.74
PTPRF-203ENST00000372407 EXT1Q16394 746 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 PAN3Q58A45 887 aaKnown RBP10.42□□□□□ -0.74
PTPRF-203ENST00000372407 OR1M1Q8NGA1 313 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 OR13C8Q8NGS7 320 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 BARHL1Q9BZE3 327 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 MOB1AQ9H8S9 216 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 ASH2LQ9UBL3 628 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 HSPB2A8KAH6 182 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 ZNF732B4DXR9 585 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 ABOP16442 354 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 RPL18Q07020 188 aaKnown RBP10.42□□□□□ -0.74
PTPRF-203ENST00000372407 MLF2Q15773 248 aaPredicted RBP10.42□□□□□ -0.74
PTPRF-203ENST00000372407 HSPB2Q16082 182 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 PRTGQ2VWP7 1150 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 ADAM5Q6NVV9 412 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 PARM1Q6UWI2 310 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 ACOT7LQ6ZUV0 252 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 BCORP1Q8N888 145 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 OR51A2Q8NGJ7 313 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 LINC00615Q96LM1 132 aaPredicted RBP10.42□□□□□ -0.74
PTPRF-203ENST00000372407 FER1L6-AS2Q96M78 137 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 RHNO1Q9BSD3 238 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 GNG13Q9P2W3 67 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 B3GAT1Q9P2W7 334 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 EXO1Q9UQ84 846 aaKnown RBP10.42□□□□□ -0.74
PTPRF-203ENST00000372407 KPTNQ9Y664 436 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 CABIN1Q9Y6J0 2220 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 IDSB3KWA1 339 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 MT-ND4LP03901 98 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 FOLR1P15328 257 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 AADACP22760 399 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 NKX2-1P43699 371 aaPredicted RBP10.42□□□□□ -0.74
PTPRF-203ENST00000372407 CYB561P49447 251 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 RBP2P50120 134 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 OR1D5P58170 312 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 MCCD1P59942 119 aaPredicted RBP10.42□□□□□ -0.74
PTPRF-203ENST00000372407 AKR1C1Q04828 323 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 BAXQ07812 192 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 DPPA2Q7Z7J5 298 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 CMTM4Q8IZR5 234 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 C16orf52Q8NHV5 167 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 SLAMF6Q96DU3 332 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 SRRQ9GZT4 340 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 TAF9BQ9HBM6 251 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 NGBQ9NPG2 151 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 IGHV3-20A0A0C4DH32 117 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 LRP5LA4QPB2 252 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 YKT6O15498 198 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 JTBO76095 146 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 TESK1Q15569 626 aa10.42□□□□□ -0.74
PTPRF-203ENST00000372407 CTF1Q16619 201 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms