RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 SLC7A6Q92536 515 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 ABCG5Q9H222 651 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 PTGES2Q9H7Z7 377 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 MRPL22Q9NWU5 206 aaKnown RBP12.56□□□□□ -0.4
LDB3-204ENST00000372066 SLCO1C1Q9NYB5 712 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 CACNG2Q9Y698 323 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 IGHV1-45A0A0A0MS14 117 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 A0A1W2PQ72 361 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 KHDRBS3O75525 346 aaKnown RBP12.56□□□□□ -0.4
LDB3-204ENST00000372066 AQP8O94778 261 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 SPARCP09486 303 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 TFPIP10646 304 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 GPR85P60893 370 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 MRPL49Q13405 166 aaKnown RBP12.56□□□□□ -0.4
LDB3-204ENST00000372066 ZNF239Q16600 458 aaKnown RBP12.56□□□□□ -0.4
LDB3-204ENST00000372066 MEP1BQ16820 701 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 PCK2Q16822 640 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 BTBD16Q32M84 506 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 OR5M10Q6IEU7 315 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 ARSKQ6UWY0 536 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 NCCRP1Q6ZVX7 275 aaPredicted RBP12.56□□□□□ -0.4
LDB3-204ENST00000372066 SLC35D2Q76EJ3 337 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 KRT77Q7Z794 578 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 RBMXL3Q8N7X1 1067 aaKnown RBP12.56□□□□□ -0.4
LDB3-204ENST00000372066 FADS6Q8N9I5 356 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 OR2M3Q8NG83 312 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 OR10G3Q8NGC4 313 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 OR52N5Q8NH56 324 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 PRR7Q8TB68 274 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 SMIM4Q8WVI0 70 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 HSD17B8Q92506 261 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 ZBTB8AQ96BR9 441 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 C8orf44Q96CB5 159 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 C5orf34Q96MH7 638 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 ABHD1Q96SE0 405 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 KCNK17Q96T54 332 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 GFI1Q99684 422 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 TSPAN10Q9H1Z9 355 aaPredicted RBP12.56□□□□□ -0.4
LDB3-204ENST00000372066 ELOVL3Q9HB03 270 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 ZNF275Q9NSD4 429 aaPredicted RBP12.56□□□□□ -0.4
LDB3-204ENST00000372066 KLHL9Q9P2J3 617 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 KLHL13Q9P2N7 655 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 VDAC3Q9Y277 283 aa12.56□□□□□ -0.4
LDB3-204ENST00000372066 RPH3AQ9Y2J0 694 aaPredicted RBP12.56□□□□□ -0.4
LDB3-204ENST00000372066 SPTAN1Q13813 2472 aaKnown RBP12.55□□□□□ -0.4
LDB3-204ENST00000372066 A1L4Q6 167 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 EEF1E1O43324 174 aaKnown RBP12.55□□□□□ -0.4
LDB3-204ENST00000372066 ZNF823P16415 610 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 DPP4P27487 766 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 OTX2P32243 289 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 RAB25P57735 213 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 MADCAM1Q13477 382 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 DYRK1AQ13627 763 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 GPR176Q14439 515 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 MELKQ14680 651 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 TATDN3Q17R31 274 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 TBRG1Q3YBR2 411 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 WDR38Q5JTN6 314 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 ATAD3CQ5T2N8 411 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 TIGD3Q6B0B8 471 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 LRRTM1Q86UE6 522 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 ZNF227Q86WZ6 799 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 TOMM5Q8N4H5 51 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 Q8NA96 180 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 SLC26A10Q8NG04 563 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 OR4K17Q8NGC6 315 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 YIPF5Q969M3 257 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 MCHR2Q969V1 340 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 PNPLA2Q96AD5 504 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 ARL5BQ96KC2 179 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 IMMP1LQ96LU5 166 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 OR2B2Q9GZK3 357 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 DPAGT1Q9H3H5 408 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 PLEKHA1Q9HB21 404 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 NLKQ9UBE8 527 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 HDGFL3Q9Y3E1 203 aa12.55□□□□□ -0.4
LDB3-204ENST00000372066 SPENQ96T58 3664 aaKnown RBP12.55□□□□□ -0.4
LDB3-204ENST00000372066 ICE1Q9Y2F5 2266 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 ANXA2P2A6NMY6 339 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 ANXA2P07355 339 aaKnown RBP12.54□□□□□ -0.4
LDB3-204ENST00000372066 RNF224P0DH78 156 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 IFNGR1P15260 489 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 KIR3DL2P43630 455 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 AP3S2P59780 193 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 POU3F1Q03052 451 aaPredicted RBP12.54□□□□□ -0.4
LDB3-204ENST00000372066 EIF2B1Q14232 305 aaKnown RBP12.54□□□□□ -0.4
LDB3-204ENST00000372066 KCNJ8Q15842 424 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 PLA1AQ53H76 456 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 SLC22A10Q63ZE4 541 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 PRSS35Q8N3Z0 413 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 ZNF433Q8N7K0 673 aaPredicted RBP12.54□□□□□ -0.4
LDB3-204ENST00000372066 OR2Y1Q8NGV0 311 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 ST6GAL2Q96JF0 529 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 SMAD5Q99717 465 aaKnown RBP12.54□□□□□ -0.4
LDB3-204ENST00000372066 MESP1Q9BRJ9 268 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 ABHD6Q9BV23 337 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 NEK6Q9HC98 313 aa12.54□□□□□ -0.4
LDB3-204ENST00000372066 SPTBN1Q01082 2364 aaKnown RBP12.54□□□□□ -0.4
LDB3-204ENST00000372066 C2orf72A6NCS6 295 aa12.53□□□□□ -0.4
LDB3-204ENST00000372066 NAP1L6A6NFF2 107 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms