RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ABHD17AQ96GS6 310 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 LINC00470Q9BZP3 86 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 SLCO5A1Q9H2Y9 848 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 GP6Q9HCN6 339 aa23.22■■□□□ 1.31
ATPAF1-202ENST00000371937 WNT11O96014 354 aa23.21■■□□□ 1.31
ATPAF1-202ENST00000371937 ZMAT1Q5H9K5 638 aa23.21■■□□□ 1.31
ATPAF1-202ENST00000371937 PLXDC2Q6UX71 529 aa23.21■■□□□ 1.31
ATPAF1-202ENST00000371937 NABP1Q96AH0 204 aa23.21■■□□□ 1.31
ATPAF1-202ENST00000371937 C4orf45Q96LM5 186 aa23.21■■□□□ 1.31
ATPAF1-202ENST00000371937 ZNF416Q9BWM5 594 aa23.21■■□□□ 1.31
ATPAF1-202ENST00000371937 CALHM2Q9HA72 323 aa23.21■■□□□ 1.31
ATPAF1-202ENST00000371937 OR4C45A6NMZ5 311 aa23.2■■□□□ 1.3
ATPAF1-202ENST00000371937 K7EM74 188 aa23.2■■□□□ 1.3
ATPAF1-202ENST00000371937 ARL6IP5O75915 188 aa23.2■■□□□ 1.3
ATPAF1-202ENST00000371937 KRT33AO76009 404 aa23.2■■□□□ 1.3
ATPAF1-202ENST00000371937 CALRP27797 417 aaKnown RBP23.2■■□□□ 1.3
ATPAF1-202ENST00000371937 DCTDP32321 178 aa23.2■■□□□ 1.3
ATPAF1-202ENST00000371937 ID4P47928 161 aa23.2■■□□□ 1.3
ATPAF1-202ENST00000371937 MTNR1BP49286 362 aa23.2■■□□□ 1.3
ATPAF1-202ENST00000371937 ALKBH3Q96Q83 286 aaPredicted RBP23.2■■□□□ 1.3
ATPAF1-202ENST00000371937 ZNF878C9JN71 531 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 CRYABP02511 175 aaKnown RBP23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 ADRB1P08588 477 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 FAM27BQ5VT28 67 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 CFAP77Q6ZQR2 320 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 PRSS35Q8N3Z0 413 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 ZNF676Q8N7Q3 588 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 OR13C5Q8NGS8 318 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 HTRA1Q92743 480 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 R4GMQ9 66 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 ANKRD11Q6UB99 2663 aaPredicted RBP23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 DVL2O14641 736 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 MYL9P24844 172 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 WDR38Q5JTN6 314 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 GJC3Q8NFK1 279 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 OR6Q1Q8NGQ2 317 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 ZNF837Q96EG3 531 aaPredicted RBP23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 C6orf62Q9GZU0 229 aaPredicted RBP23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 NIPAL2Q9H841 368 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 GPR35Q9HC97 309 aa23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 PHF3Q92576 2039 aaKnown RBP23.19■■□□□ 1.3
ATPAF1-202ENST00000371937 A0A1B0GTH9 108 aa23.18■■□□□ 1.3
ATPAF1-202ENST00000371937 ZNF829Q3KNS6 432 aaPredicted RBP23.18■■□□□ 1.3
ATPAF1-202ENST00000371937 KLHL24Q6TFL4 600 aa23.18■■□□□ 1.3
ATPAF1-202ENST00000371937 UNQ9370/PRO34162Q6UXP9 181 aa23.18■■□□□ 1.3
ATPAF1-202ENST00000371937 OR10S1Q8NGN2 331 aa23.18■■□□□ 1.3
ATPAF1-202ENST00000371937 BARHL1Q9BZE3 327 aa23.18■■□□□ 1.3
ATPAF1-202ENST00000371937 TMEM38BQ9NVV0 291 aa23.18■■□□□ 1.3
ATPAF1-202ENST00000371937 CLEC4AQ9UMR7 237 aa23.18■■□□□ 1.3
ATPAF1-202ENST00000371937 LHX6Q9UPM6 363 aa23.18■■□□□ 1.3
ATPAF1-202ENST00000371937 RAXQ9Y2V3 346 aa23.18■■□□□ 1.3
ATPAF1-202ENST00000371937 A0A075B6Q4 140 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 OR14I1A6ND48 311 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 TGM6O95932 706 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 PNPP00491 289 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 CLEC2LP0C7M8 214 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 ENDOGQ14249 297 aaKnown RBP23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 STK11Q15831 433 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 CEACAM16Q2WEN9 425 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 PLEKHN1Q494U1 663 aaPredicted RBP23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 TSPO2Q5TGU0 170 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 P4HA3Q7Z4N8 544 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 ADGRE4PQ86SQ3 457 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 TPRA1Q86W33 373 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 CATSPERDQ86XM0 798 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 EXTL1Q92935 676 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 APH1AQ96BI3 265 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 OR14A2Q96R54 314 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 GLRX2Q9NS18 164 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 CRNNQ9UBG3 495 aaPredicted RBP23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 FBXL3Q9UKT7 428 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 GTF2A1LQ9UNN4 478 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 ARPC4-TTLL3A0A0A6YYG9 625 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 TMEM269A0A1B0GVZ9 245 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 ZNF879B4DU55 563 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 LOC110117498-PIK3R3F6TDL0 507 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 RER1O15258 196 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 SRSF10O75494 262 aaKnown RBP23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 UCHL1P09936 223 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 MAPK3P27361 379 aaPredicted RBP23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 KIR3DL2P43630 455 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 MMP16P51512 607 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 ROR2Q01974 943 aaKnown RBP23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 HNRNPA0Q13151 305 aaKnown RBP23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 TAF13Q15543 124 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 FOXB1Q99853 325 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 PPIL3Q9H2H8 161 aaKnown RBP23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 EMC9Q9Y3B6 208 aa23.17■■□□□ 1.3
ATPAF1-202ENST00000371937 DMXL2Q8TDJ6 3036 aa23.16■■□□□ 1.3
ATPAF1-202ENST00000371937 VGLL3A8MV65 326 aa23.16■■□□□ 1.3
ATPAF1-202ENST00000371937 BMXP51813 675 aa23.16■■□□□ 1.3
ATPAF1-202ENST00000371937 Q499Y3 187 aa23.16■■□□□ 1.3
ATPAF1-202ENST00000371937 FAM27D1Q5T7N8 215 aa23.16■■□□□ 1.3
ATPAF1-202ENST00000371937 LINGO2Q7L985 606 aa23.16■■□□□ 1.3
ATPAF1-202ENST00000371937 ZC3HAV1Q7Z2W4 902 aaKnown RBP23.16■■□□□ 1.3
ATPAF1-202ENST00000371937 LRRC18Q8N456 261 aa23.16■■□□□ 1.3
ATPAF1-202ENST00000371937 GPR148Q8TDV2 347 aa23.16■■□□□ 1.3
ATPAF1-202ENST00000371937 S100ZQ8WXG8 99 aa23.16■■□□□ 1.3
ATPAF1-202ENST00000371937 RGP1Q92546 391 aaPredicted RBP23.16■■□□□ 1.3
ATPAF1-202ENST00000371937 THRSPQ92748 146 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms