RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 IGHV3-15A0A0B4J1V0 119 aa20.22■□□□□ 0.83
TM9SF3-201ENST00000371142 SPI1P17947 270 aa20.22■□□□□ 0.83
TM9SF3-201ENST00000371142 OR2B11Q5JQS5 317 aa20.22■□□□□ 0.83
TM9SF3-201ENST00000371142 KLHDC8BQ8IXV7 354 aa20.22■□□□□ 0.83
TM9SF3-201ENST00000371142 EGLN1Q9GZT9 426 aa20.22■□□□□ 0.83
TM9SF3-201ENST00000371142 EXO1Q9UQ84 846 aaKnown RBP20.22■□□□□ 0.83
TM9SF3-201ENST00000371142 A0A096LPE4 126 aa20.22■□□□□ 0.83
TM9SF3-201ENST00000371142 A0A1W2PPZ6 126 aa20.22■□□□□ 0.83
TM9SF3-201ENST00000371142 SIRPB1O00241 398 aa20.22■□□□□ 0.83
TM9SF3-201ENST00000371142 CTU2Q2VPK5 515 aaKnown RBP20.22■□□□□ 0.83
TM9SF3-201ENST00000371142 KHDC1LQ5JSQ8 128 aa20.22■□□□□ 0.83
TM9SF3-201ENST00000371142 CRLF2Q9HC73 371 aa20.22■□□□□ 0.83
TM9SF3-201ENST00000371142 SLCO1B1Q9Y6L6 691 aa20.22■□□□□ 0.83
TM9SF3-201ENST00000371142 ST6GAL1P15907 406 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 CD22P20273 847 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 P2RX3P56373 397 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 FCRL6Q6DN72 434 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 OR6K3Q8NGY3 331 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 LRP5LA4QPB2 252 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 MAGEB4O15481 346 aaPredicted RBP20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 APOA2P02652 100 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 TBXA2RP21731 343 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 SDHAP31040 664 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 DUSP2Q05923 314 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 HINT3Q9NQE9 182 aaKnown RBP20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 THBS1P07996 1170 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 CHRM2P08172 466 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 PIPP12273 146 aaPredicted RBP20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 TMEM200AQ86VY9 491 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 NDRG4Q9ULP0 352 aaKnown RBP20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 URGCP-MRPS24S4R325 110 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 TOPAZ1Q8N9V7 1692 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 PRAMEF5Q5TYX0 476 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 PRAMEF6Q5VXH4 476 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 CA13Q8N1Q1 262 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 ZNF2Q9BSG1 426 aaPredicted RBP20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 MFRPQ9BY79 579 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 C20orf202A1L168 122 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 DUSP6Q16828 381 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 OTPQ5XKR4 325 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 SPACA5Q96QH8 159 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 B3GALT5Q9Y2C3 310 aa20.21■□□□□ 0.83
TM9SF3-201ENST00000371142 SELEP16581 610 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 JUNBP17275 347 aaPredicted RBP20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 PCSK6P29122 969 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 UBE2G2P60604 165 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 IL10RAQ13651 578 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 USP51Q70EK9 711 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 BAHD1Q8TBE0 780 aaPredicted RBP20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 RIMS4Q9H426 269 aaPredicted RBP20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 GAB2Q9UQC2 676 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 TMEM129A0AVI4 362 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 C5orf49A4QMS7 147 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 RBPMSQ93062 196 aaKnown RBP20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 ATP23Q9Y6H3 246 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 SLC19A1P41440 591 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 KIR2DL3P43628 341 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 ISL1P61371 349 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 SLC35A2P78381 396 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 ZNF620Q6ZNG0 422 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 OR13C5Q8NGS8 318 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 TMEM200CA6NKL6 621 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 DFFBO76075 338 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 DPTQ07507 201 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 AVPI1Q5T686 147 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 TFAP2EQ6VUC0 442 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 KCNRGQ8N5I3 272 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 OR52H1Q8NGJ2 320 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 KCNIP2Q9NS61 270 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 TIMM10BQ9Y5J6 103 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 NKX2-1P43699 371 aaPredicted RBP20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 PPP2CBP62714 309 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 PPP2CAP67775 309 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 ANKRD16Q6P6B7 361 aa20.2■□□□□ 0.82
TM9SF3-201ENST00000371142 CRYM-AS1A6NIL9 109 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 RAC1P63000 192 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 SLC25A37Q9NYZ2 338 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 GLAP06280 429 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 PPIAP62937 165 aaKnown RBP20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 SPNS2Q8IVW8 549 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 OR1N1Q8NGS0 311 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 CSAG2Q9Y5P2 127 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 DGCR2P98153 550 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 FLI1Q01543 452 aaPredicted RBP20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 ZNF705AQ6ZN79 300 aaPredicted RBP20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 MARC2Q969Z3 335 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 PTDSS2Q9BVG9 487 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 PDFQ9HBH1 243 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 KIR2DS1A0A191URI9 304 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 CPEP16870 476 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 KIR2DS4P43632 304 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 DUSP8Q13202 625 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 KIR2DS1Q14954 304 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 CD276Q5ZPR3 534 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 DEFB108BQ8NET1 73 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 OPALINQ96PE5 141 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 FCMRO60667 390 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 ACKR3P25106 362 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 DUSP1P28562 367 aa20.19■□□□□ 0.82
TM9SF3-201ENST00000371142 RPL18Q07020 188 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms