RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 EIF3KQ9UBQ5 218 aaKnown RBP3.45□□□□□ -1.86
MCF2-203ENST00000370576 BCAP29Q9UHQ4 241 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 XIRP2A4UGR9 3374 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 hCG_2039718K7EN88 272 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 SURF4O15260 269 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 ENTPD5O75356 428 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 NKX2-2O95096 273 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 IGKV3-11P04433 115 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 LINC00032P0C843 101 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 OCMP0CE72 109 aaPredicted RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 C8orf88P0DMB2 117 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 HLA-EP13747 358 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 ZNF182P17025 639 aaPredicted RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 NDUFB7P17568 137 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 ATP5A1P25705 553 aaKnown RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 SLC19A1P41440 591 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 ZNF133P52736 654 aaPredicted RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 IL13RA1P78552 427 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 LSM11P83369 360 aaKnown RBP eCLIP3.44□□□□□ -1.86
MCF2-203ENST00000370576 HSPB3Q12988 150 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 ARHGAP11BQ3KRB8 267 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 ENTPD8Q5MY95 495 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 FBXW9Q5XUX1 488 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 OR4C11Q6IEV9 310 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 CALHM1Q8IU99 346 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 MMAAQ8IVH4 418 aaKnown RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 DEFB107AQ8IZN7 70 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 TMEM132CQ8N3T6 1108 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 OR1L4Q8NGR5 311 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 OR6K2Q8NGY2 324 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 NEK7Q8TDX7 302 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 DYDC1Q8WWB3 177 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 OR10C1Q96KK4 312 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 ZNF184Q99676 751 aaPredicted RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 TLNRD1Q9H1K6 362 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 Q9H8V8 135 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 MRPL22Q9NWU5 206 aaKnown RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 TMEM9Q9P0T7 183 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 OR52A1Q9UKL2 312 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 CEPT1Q9Y6K0 416 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 SZT2Q5T011 3432 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 A0A0J9YY10 115 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 A0A1W2PQD3 144 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 KPNA4O00629 521 aaPredicted RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 ARPC1BO15143 372 aaKnown RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 ARPC5O15511 151 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 TMPRSS11DO60235 418 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 RNASEH1O60930 286 aaKnown RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 RAD51DO75771 328 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 MPZL1O95297 269 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 IGHMP01871 453 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 KLK3P07288 261 aaPredicted RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 UBCP0CG48 685 aaKnown RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 CD8BP10966 210 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 IL7RP16871 459 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 APEX1P27695 318 aaKnown RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 PSMD4P55036 377 aaKnown RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 OR4D2P58180 307 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 MYBPC1Q00872 1141 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 HHEXQ03014 270 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 PJVKQ0ZLH3 352 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 ZNF630Q2M218 657 aaPredicted RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 VMACQ2NL98 169 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 OR2G6Q5TZ20 316 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 CD276Q5ZPR3 534 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 SPESP1Q6UW49 350 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 UNQ9370/PRO34162Q6UXP9 181 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 NOXA1Q86UR1 476 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 CA13Q8N1Q1 262 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 ZNF615Q8N8J6 731 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 NAT16Q8N8M0 369 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 OR9I1Q8NGQ6 314 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 PNPT1Q8TCS8 783 aaKnown RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 C22orf15Q8WYQ4 148 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 LIN37Q96GY3 246 aaPredicted RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 SORCS2Q96PQ0 1159 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 GPX7Q96SL4 187 aaPredicted RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 C7orf50Q9BRJ6 194 aaKnown RBP3.44□□□□□ -1.86
MCF2-203ENST00000370576 SIGLEC8Q9NYZ4 499 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 PTTG2Q9NZH5 202 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 GHRLQ9UBU3 117 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 PACSIN3Q9UKS6 424 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 ANKRD12Q6UB98 2062 aa3.44□□□□□ -1.86
MCF2-203ENST00000370576 OR2AT4A6NND4 320 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 C9J4A7 227 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 H3BNH8 94 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 HMGN4O00479 90 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 PPP1R2P9O14990 202 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 KIAA0513O60268 411 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 GALR3O60755 368 aaPredicted RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 WBP4O75554 376 aaKnown RBP3.43□□□□□ -1.86
MCF2-203ENST00000370576 MED26O95402 600 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 ANP32DO95626 131 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 SEMA4FO95754 770 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 IFNA2P01563 188 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 IFNA5P01569 189 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 CD63P08962 238 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 FBP1P09467 338 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 UGT2B7P16662 529 aa3.43□□□□□ -1.86
MCF2-203ENST00000370576 GPR1P46091 355 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms