RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SLC7A6OSQ96CW6 309 aaPredicted RBP16.2■□□□□ 0.18
CKS1B-203ENST00000368439 NMNAT3Q96T66 252 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 THTPAQ9BU02 230 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 IFT27Q9BW83 186 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 EGLN3Q9H6Z9 239 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 B9D1Q9UPM9 204 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 JMJD1CQ15652 2540 aa16.2■□□□□ 0.18
CKS1B-203ENST00000368439 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.19■□□□□ 0.182e-9■■■■□ 19.6
CKS1B-203ENST00000368439 SGCEO43556 437 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 CRLF1O75462 422 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 MPV17P39210 176 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 SCRN3Q0VDG4 424 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 TRAP1Q12931 704 aaKnown RBP16.19■□□□□ 0.18
CKS1B-203ENST00000368439 AQP6Q13520 282 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 CCDC92Q53HC0 331 aaPredicted RBP16.19■□□□□ 0.18
CKS1B-203ENST00000368439 OR2T5Q6IEZ7 315 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 LEG1Q6P5S2 330 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 PRIMA1Q86XR5 153 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 ADGRG5Q8IZF4 528 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 ICA1LQ8NDH6 482 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 ZNF540Q8NDQ6 660 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 OR2T29Q8NH02 315 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 OR4K13Q8NH42 304 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 SLC25A40Q8TBP6 338 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 POP5Q969H6 163 aaKnown RBP16.19■□□□□ 0.18
CKS1B-203ENST00000368439 C4orf45Q96LM5 186 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 DDOQ99489 341 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 PLA2G12AQ9BZM1 189 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 RERGLQ9H628 205 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 YAE1D1Q9NRH1 226 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 SLCO1C1Q9NYB5 712 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 IL20Q9NYY1 176 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 ASH2LQ9UBL3 628 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 EIF3KQ9UBQ5 218 aaKnown RBP16.19■□□□□ 0.18
CKS1B-203ENST00000368439 NDRG4Q9ULP0 352 aaKnown RBP16.19■□□□□ 0.18
CKS1B-203ENST00000368439 CDH10Q9Y6N8 788 aa16.19■□□□□ 0.18
CKS1B-203ENST00000368439 OR6C68A6NDL8 312 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 C17orf100A8MU93 164 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 BHLHE40O14503 412 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 IDH3BO43837 385 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 DOK2O60496 412 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 LILRA1O75019 489 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 CCNB2O95067 398 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 TACSTD2P09758 323 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 ZNF23P17027 643 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 COL8A2P25067 703 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 CRABP1P29762 137 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 MAGEB1P43366 347 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 SELENOVP59797 346 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 HIST1H3AP68431 136 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 NKPD1Q17RQ9 610 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 FAM98BQ52LJ0 330 aaKnown RBP16.18■□□□□ 0.18
CKS1B-203ENST00000368439 ZNF362Q5T0B9 420 aaPredicted RBP16.18■□□□□ 0.18
CKS1B-203ENST00000368439 SPATA46Q5T0L3 261 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 HIST2H3PS2Q5TEC6 136 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 MBNL2Q5VZF2 373 aaKnown RBP16.18■□□□□ 0.18
CKS1B-203ENST00000368439 RASSF6Q6ZTQ3 369 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 HIST2H3AQ71DI3 136 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 ZBTB46Q86UZ6 589 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 OR8D4Q8NGM9 314 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 ABHD4Q8TB40 342 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 KLF14Q8TD94 323 aaPredicted RBP16.18■□□□□ 0.18
CKS1B-203ENST00000368439 IPCEF1Q8WWN9 437 aaPredicted RBP16.18■□□□□ 0.18
CKS1B-203ENST00000368439 GTF3AQ92664 365 aaKnown RBP16.18■□□□□ 0.18
CKS1B-203ENST00000368439 YIPF5Q969M3 257 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 OR2J1Q9GZK6 312 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 RACGAP1Q9H0H5 632 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 SRA1Q9HD15 236 aaKnown RBP16.18■□□□□ 0.18
CKS1B-203ENST00000368439 HINT3Q9NQE9 182 aaKnown RBP16.18■□□□□ 0.18
CKS1B-203ENST00000368439 LHFPL6Q9Y693 200 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 SVEP1Q4LDE5 3571 aa16.18■□□□□ 0.18
CKS1B-203ENST00000368439 OR6C6A6NF89 314 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 RAP2AP10114 183 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 HTR5AP47898 357 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 MMP15P51511 669 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 PPP1CBP62140 327 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 MEP1BQ16820 701 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 MICAQ29983 383 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 ZNF718Q3SXZ3 478 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 CYB5R2Q6BCY4 276 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 RPL13AP3Q6NVV1 102 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 DNM1P34Q6PK57 102 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 JAZF1Q86VZ6 243 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 C1orf174Q8IYL3 243 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 NPEPL1Q8NDH3 523 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 SDR9C7Q8NEX9 313 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 SLC26A10Q8NG04 563 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 SOX7Q9BT81 388 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 FN3KQ9H479 309 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 POFUT1Q9H488 388 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 RPRD1BQ9NQG5 326 aaKnown RBP16.17■□□□□ 0.18
CKS1B-203ENST00000368439 NKIRAS2Q9NYR9 191 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 GPR160Q9UJ42 338 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 U3KQV3 271 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 CUBNO60494 3623 aa16.17■□□□□ 0.18
CKS1B-203ENST00000368439 AQP12BA6NM10 295 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 A8MV72 311 aaPredicted RBP16.16■□□□□ 0.18
CKS1B-203ENST00000368439 RER1O15258 196 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 RP2O75695 350 aa16.16■□□□□ 0.18
CKS1B-203ENST00000368439 RENP00797 406 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms