RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C10orf128Q5T292 105 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 CD276Q5ZPR3 534 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 MOGAT3Q86VF5 341 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 PNLDC1Q8NA58 520 aaKnown RBP12.03□□□□□ -0.48
VAMP4-202ENST00000367740 SPERTQ8NA61 448 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 NPEPL1Q8NDH3 523 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 WFDC9Q8NEX5 89 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 IFT81Q8WYA0 676 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 SEPHS2Q99611 448 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 OR2H1Q9GZK4 316 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 KCNN2Q9H2S1 579 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 UGT2A1Q9Y4X1 527 aa12.03□□□□□ -0.48
VAMP4-202ENST00000367740 A0A0B4J2E0 115 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 A0A1B0GX12 115 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 OR6A2O95222 327 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 SLC2A10O95528 541 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 VSIG10L2P0DP72 767 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 CD28P10747 220 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 PMELP40967 661 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 ZNF133P52736 654 aaPredicted RBP12.02□□□□□ -0.49
VAMP4-202ENST00000367740 DSTNP60981 165 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 ARF6P62330 175 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 CEP85LQ5SZL2 805 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 CASC10Q5T4H9 136 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 NDUFA11Q86Y39 141 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 ATG16L2Q8NAA4 619 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 C19orf18Q8NEA5 215 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 OR4C13Q8NGP0 309 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 OR5R1Q8NH85 324 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 OR2T6Q8NHC8 308 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 CMBLQ96DG6 245 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 PPP1R36Q96LQ0 422 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 TMEM43Q9BTV4 400 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 MRPL13Q9BYD1 178 aaKnown RBP12.02□□□□□ -0.49
VAMP4-202ENST00000367740 AKTIPQ9H8T0 292 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 SMURF1Q9HCE7 757 aa12.02□□□□□ -0.49
VAMP4-202ENST00000367740 LRRC30A6NM36 301 aa12.01□□□□□ -0.49
VAMP4-202ENST00000367740 RNF13O43567 381 aa12.01□□□□□ -0.49
VAMP4-202ENST00000367740 KRT75O95678 551 aa12.01□□□□□ -0.49
VAMP4-202ENST00000367740 ABHD16AO95870 558 aa12.01□□□□□ -0.49
VAMP4-202ENST00000367740 CLNS1AP54105 237 aaKnown RBP12.01□□□□□ -0.49
VAMP4-202ENST00000367740 VMO1Q7Z5L0 202 aa12.01□□□□□ -0.49
VAMP4-202ENST00000367740 CALHM3Q86XJ0 350 aa12.01□□□□□ -0.49
VAMP4-202ENST00000367740 C1orf87Q8N0U7 546 aa12.01□□□□□ -0.49
VAMP4-202ENST00000367740 OR5AS1Q8N127 324 aa12.01□□□□□ -0.49
VAMP4-202ENST00000367740 TMCC3Q9ULS5 477 aa12.01□□□□□ -0.49
VAMP4-202ENST00000367740 CAB39Q9Y376 341 aaPredicted RBP12.01□□□□□ -0.49
VAMP4-202ENST00000367740 IGKV1D-43A0A0B4J1Z2 117 aa12□□□□□ -0.49
VAMP4-202ENST00000367740 LCE6AA0A183 80 aa12□□□□□ -0.49
VAMP4-202ENST00000367740 F13BP05160 661 aa12□□□□□ -0.49
VAMP4-202ENST00000367740 HOXA4Q00056 320 aaPredicted RBP12□□□□□ -0.49
VAMP4-202ENST00000367740 NUDCD3Q8IVD9 361 aa12□□□□□ -0.49
VAMP4-202ENST00000367740 C4orf33Q8N1A6 199 aa12□□□□□ -0.49
VAMP4-202ENST00000367740 HAVCR1Q96D42 359 aa12□□□□□ -0.49
VAMP4-202ENST00000367740 CITED2Q99967 270 aaPredicted RBP12□□□□□ -0.49
VAMP4-202ENST00000367740 MMADHCQ9H3L0 296 aaPredicted RBP12□□□□□ -0.49
VAMP4-202ENST00000367740 CENPHQ9H3R5 247 aa12□□□□□ -0.49
VAMP4-202ENST00000367740 RANBP3Q9H6Z4 567 aaPredicted RBP12□□□□□ -0.49
VAMP4-202ENST00000367740 CNTD2Q9H8S5 307 aa12□□□□□ -0.49
VAMP4-202ENST00000367740 TBCCD1Q9NVR7 557 aa12□□□□□ -0.49
VAMP4-202ENST00000367740 SELENONQ9NZV5 590 aa12□□□□□ -0.49
VAMP4-202ENST00000367740 HUWE1Q7Z6Z7 4374 aaKnown RBP11.99□□□□□ -0.49
VAMP4-202ENST00000367740 MLNRO43193 412 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 FCN3O75636 299 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 KRT4P19013 534 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 PRKAR1BP31321 381 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 RPL4P36578 427 aaKnown RBP11.99□□□□□ -0.49
VAMP4-202ENST00000367740 SRP9P49458 86 aaKnown RBP11.99□□□□□ -0.49
VAMP4-202ENST00000367740 CDH12P55289 794 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 GUCY1A3Q02108 690 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 FMODQ06828 376 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 EGFEM1PQ0D2K5 195 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 OR1Q1Q15612 314 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 SGCAQ16586 387 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 ZNF74Q16587 644 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 KLHL22Q53GT1 634 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 ARL9Q6T311 187 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 IGFN1Q86VF2 1251 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 ALDH16A1Q8IZ83 802 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 PAPD5Q8NDF8 572 aaKnown RBP11.99□□□□□ -0.49
VAMP4-202ENST00000367740 NPRL2Q8WTW4 380 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 ZIM3Q96PE6 472 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 BCL2L10Q9HD36 194 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 ERVK-18Q9QC07 812 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 STARD10Q9Y365 291 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 STARD9Q9P2P6 4700 aa11.99□□□□□ -0.49
VAMP4-202ENST00000367740 MEGF11A6BM72 1044 aa11.98□□□□□ -0.49
VAMP4-202ENST00000367740 E9PQ18 207 aa11.98□□□□□ -0.49
VAMP4-202ENST00000367740 F5H5P2 479 aa11.98□□□□□ -0.49
VAMP4-202ENST00000367740 H3BUX3 64 aa11.98□□□□□ -0.49
VAMP4-202ENST00000367740 OR10H3O60404 316 aa11.98□□□□□ -0.49
VAMP4-202ENST00000367740 TPST2O60704 377 aa11.98□□□□□ -0.49
VAMP4-202ENST00000367740 TRMUO75648 421 aaKnown RBP11.98□□□□□ -0.49
VAMP4-202ENST00000367740 TUBG1P23258 451 aa11.98□□□□□ -0.49
VAMP4-202ENST00000367740 IL12AP29459 219 aa11.98□□□□□ -0.49
VAMP4-202ENST00000367740 NME5P56597 212 aa11.98□□□□□ -0.49
VAMP4-202ENST00000367740 NCALDP61601 193 aa11.98□□□□□ -0.49
VAMP4-202ENST00000367740 PRB3Q04118 309 aaPredicted RBP11.98□□□□□ -0.49
VAMP4-202ENST00000367740 FAM27BQ5VT28 67 aa11.98□□□□□ -0.49
VAMP4-202ENST00000367740 TRMT10CQ7L0Y3 403 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms