RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 FBXO7Q9Y3I1 522 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 NPTNQ9Y639 398 aa6.62□□□□□ -1.35
VTA1-202ENST00000367630 C13orf42A0A1B0GVH6 325 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 NPIPA7E9PJI5 369 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 FRS3O43559 492 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 GCM2O75603 506 aaPredicted RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 MBPP02686 304 aaPredicted RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 CA3P07451 260 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 NPIPA8P0DM63 369 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 SLC2A5P22732 501 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 PSMB6P28072 239 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 EPHA2P29317 976 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 CSF2RBP32927 897 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 DRD3P35462 400 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 MECP2P51608 486 aaKnown RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 Q7L0L9 218 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 FAM71E2Q8N5Q1 922 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 SLC37A2Q8TED4 501 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 DUSP19Q8WTR2 217 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 UBE2FQ969M7 185 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 WWTR1Q9GZV5 400 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 PLXNA2O75051 1894 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 F8W036 122 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 CYR61O00622 381 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 MBP02144 154 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 SPNP16150 400 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 ABCD3P28288 659 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 DUSP1P28562 367 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 PMELP40967 661 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 OR1D4P47884 311 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 IKZF1Q13422 519 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 SNTB1Q13884 538 aaKnown RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 AKR1C8PQ5T2L2 129 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 ZNF684Q5T5D7 378 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 LILRA3Q8N6C8 439 aaPredicted RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 FAM131CQ96AQ9 280 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 ORAI1Q96D31 301 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 RAB39BQ96DA2 213 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 TMEM121BQ9BXQ6 578 aaPredicted RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 FBLN5Q9UBX5 448 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 ZFC3H1O60293 1989 aaKnown RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 LOC107986453A0A1B0GWG9 222 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 K7EPK0 472 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 ICMTO60725 284 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 CRTAPO75718 401 aaPredicted RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 ARR3P36575 388 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 F2RL1P55085 397 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 MTCP1P56278 107 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 DGCR2P98153 550 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 TRMT12Q53H54 448 aaKnown RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 PAN3Q58A45 887 aaKnown RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 TMEM215Q68D42 235 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 VASNQ6EMK4 673 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 Q8IYB0 196 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 PNPLA1Q8N8W4 532 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 NKX3-1Q99801 234 aaPredicted RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 POFUT1Q9H488 388 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 TRBV5-7A0A0A0MS05 114 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 FAM183AA6NL82 134 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 HTR3BO95264 441 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 DUS4LO95620 317 aaKnown RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 OR4E1P0C645 316 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 ANKRD34CP0C6C1 535 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 ZNF35P13682 527 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 RPS15P62841 145 aaKnown RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 HBG1P69891 147 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 HBG2P69892 147 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 OR7A5Q15622 319 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 LGALSLQ3ZCW2 172 aaPredicted RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 AVPI1Q5T686 147 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 NPSR1Q6W5P4 371 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 RBMS3Q6XE24 437 aaKnown RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 C16orf52Q8NHV5 167 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 ZNF346Q9UL40 294 aaKnown RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 LOC105369274A0A096LPK9 316 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 A0A1W2PNV4 684 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 OR6C6A6NF89 314 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 C17orf112F2Z3M2 114 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 SELENOFO60613 162 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 EXOSC2Q13868 293 aaKnown RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 C11orf87Q6NUJ2 197 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 NAA40Q86UY6 237 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 MAML2Q8IZL2 1156 aaPredicted RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 OR4N4Q8N0Y3 316 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 KCNRGQ8N5I3 272 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 SLC25A18Q9H1K4 315 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 PLEKHJ1Q9NW61 149 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 CHST2Q9Y4C5 530 aa6.61□□□□□ -1.35
VTA1-202ENST00000367630 RBM7Q9Y580 266 aaKnown RBP6.61□□□□□ -1.35
VTA1-202ENST00000367630 KCNJ3P48549 501 aa6.6□□□□□ -1.35
VTA1-202ENST00000367630 DHPSP49366 369 aaPredicted RBP6.6□□□□□ -1.35
VTA1-202ENST00000367630 NKX2-5P52952 324 aaPredicted RBP6.6□□□□□ -1.35
VTA1-202ENST00000367630 IL11RAQ14626 422 aa6.6□□□□□ -1.35
VTA1-202ENST00000367630 LYSMD4Q5XG99 296 aa6.6□□□□□ -1.35
VTA1-202ENST00000367630 SYT9Q86SS6 491 aa6.6□□□□□ -1.35
VTA1-202ENST00000367630 EIF4E3Q8N5X7 224 aaKnown RBP6.6□□□□□ -1.35
VTA1-202ENST00000367630 OR8D4Q8NGM9 314 aa6.6□□□□□ -1.35
VTA1-202ENST00000367630 OR5M8Q8NGP6 311 aa6.6□□□□□ -1.35
VTA1-202ENST00000367630 OR10K1Q8NGX5 313 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms