RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 RAB35Q15286 201 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 ISXQ2M1V0 245 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 ABLIM2Q6H8Q1 611 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 NDUFAF7Q7L592 441 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 SORCS2Q96PQ0 1159 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 NOX4Q9NPH5 578 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 ZNF275Q9NSD4 429 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 SIGLEC7Q9Y286 467 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 KIF26BQ2KJY2 2108 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 NUDT21O43809 227 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 RGS11O94810 467 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR2F2O95006 317 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 HLA-HP01893 362 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 GUSBP08236 651 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 LIMS3P0CW19 117 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 LIMS4P0CW20 117 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 PSMB10P40306 273 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 KIR2DL3P43628 341 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 HOXA1P49639 335 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 HSF1Q00613 529 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR2F1Q13607 317 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 TAF9Q16594 264 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 PRICKLE4Q2TBC4 344 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 UBE3DQ7Z6J8 389 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 SIGLECL1Q8N7X8 197 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 TMEM99Q8N816 258 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 LPAR4Q99677 370 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 PRR14Q9BWN1 585 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 MED20Q9H944 212 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 MBD1Q9UIS9 605 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 A0A087X0M5 115 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 A0A1B0GX30 115 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 TLCD2A6NGC4 264 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 TNFSF14O43557 240 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 PMS2P2O95744 297 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 MSX1P28360 303 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 EEF1A1P68104 462 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 TMPRSS9Q7Z410 1059 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 FJX1Q86VR8 437 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 COMMD1Q8N668 190 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 HOXB13Q92826 284 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 TOMM40LQ969M1 308 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 UBL7Q96S82 380 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 POFUT1Q9H488 388 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 C1orf123Q9NWV4 160 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 NPIPA2E9PIF3 369 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 NPIPA3F8WFD2 350 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 ARPC3O15145 178 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 FGF17O60258 216 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 CLN5O75503 358 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 UTS2O95399 124 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 MFGE8Q08431 387 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 DEFB110Q30KQ9 67 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 CARFQ8N187 725 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 NKAIN3Q8N8D7 197 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 ZNF610Q8N9Z0 462 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 BPIFCQ8NFQ6 507 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 NMNAT3Q96T66 252 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 PLEKHB1Q9UF11 243 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 GDF2Q9UK05 429 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 MMP17Q9ULZ9 603 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 A0A1W2PPV4 95 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 ANKRD61A6NGH8 418 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 TMEM200CA6NKL6 621 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 LEUTXA8MZ59 168 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 M0QZK8 103 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 HCRTR1O43613 425 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 GGCTO75223 188 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 IL5P05113 134 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 HLA-DOBP13765 273 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 PVRP15151 417 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 GALNSP34059 522 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 LIMK1P53667 647 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 C17orf67Q0P5P2 114 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 RIN1Q13671 783 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 NSDHLQ15738 373 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 NNATQ16517 81 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 GLYR1Q49A26 553 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 EEF1A1P5Q5VTE0 462 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 TRILQ7L0X0 811 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 SULF2Q8IWU5 870 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 SLC41A2Q96JW4 573 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 ELOVL3Q9HB03 270 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 CUTCQ9NTM9 273 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 SUSD2Q9UGT4 822 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 V9GYS6 101 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 SCN10AQ9Y5Y9 1956 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 SCO2O43819 266 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 LY86O95711 162 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 ANXA7P20073 488 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 CD38P28907 300 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 CSF2RBP32927 897 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 SLC25A1P53007 311 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 GPLD1P80108 840 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 FABP9Q0Z7S8 132 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 HYAL4Q2M3T9 481 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 LPCAT3Q6P1A2 487 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 TRAPPC6BQ86SZ2 158 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR6N1Q8NGY5 312 aa4.89□□□□□ -1.63
CDC42BPA-204ENST00000366767 MEGF10Q96KG7 1140 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms