RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 CAPZA1P52907 286 aa17.17■□□□□ 0.34
CMTM3-201ENST00000361909 RPS4XP62701 263 aaKnown RBP17.17■□□□□ 0.34
CMTM3-201ENST00000361909 SMCO1Q147U7 214 aa17.17■□□□□ 0.34
CMTM3-201ENST00000361909 TMEM200AQ86VY9 491 aa17.17■□□□□ 0.34
CMTM3-201ENST00000361909 OR4A4PQ8NGN8 299 aa17.17■□□□□ 0.34
CMTM3-201ENST00000361909 OR2G2Q8NGZ5 317 aa17.17■□□□□ 0.34
CMTM3-201ENST00000361909 DVL3Q92997 716 aaPredicted RBP17.17■□□□□ 0.34
CMTM3-201ENST00000361909 ADAP2Q9NPF8 381 aa17.17■□□□□ 0.34
CMTM3-201ENST00000361909 ADAM18Q9Y3Q7 739 aa17.17■□□□□ 0.34
CMTM3-201ENST00000361909 COLCA2A8K830 154 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 ZNF736B4DX44 427 aaPredicted RBP17.16■□□□□ 0.34
CMTM3-201ENST00000361909 DOK2O60496 412 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 CELA2BP08218 269 aaPredicted RBP17.16■□□□□ 0.34
CMTM3-201ENST00000361909 ACAA2P42765 397 aaKnown RBP17.16■□□□□ 0.34
CMTM3-201ENST00000361909 PPICP45877 212 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 AKR1C2P52895 323 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 RPS15AP62244 130 aaKnown RBP17.16■□□□□ 0.34
CMTM3-201ENST00000361909 CYCSP99999 105 aaKnown RBP17.16■□□□□ 0.34
CMTM3-201ENST00000361909 AKR1C1Q04828 323 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 PLEKHN1Q494U1 663 aaPredicted RBP17.16■□□□□ 0.34
CMTM3-201ENST00000361909 FAM166AQ6J272 317 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 CDC20BQ86Y33 519 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 BOLLQ8N9W6 283 aaKnown RBP17.16■□□□□ 0.34
CMTM3-201ENST00000361909 FLVCR1-AS1Q8TAF5 88 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 SLC37A2Q8TED4 501 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 ADAD1Q96M93 576 aaKnown RBP17.16■□□□□ 0.34
CMTM3-201ENST00000361909 ATG5Q9H1Y0 275 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 METTL1Q9UBP6 276 aaKnown RBP17.16■□□□□ 0.34
CMTM3-201ENST00000361909 TMEM14AQ9Y6G1 99 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 NPIPA5A0A0B4J1W7 369 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 A0A1B0GVT2 93 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 NPIPA7E9PJI5 369 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 BLOC1S5-TXNDC5H3BN57 136 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 WRBO00258 174 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 ZNF208O43345 1280 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 TNFSF14O43557 240 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 CD14P08571 375 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 NPIPA8P0DM63 369 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 BCKDHBP21953 392 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 HAAOP46952 286 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 NXPH1P58417 271 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 NR0B2Q15466 257 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 BEX5Q5H9J7 111 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 PHF19Q5T6S3 580 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 ARHGAP40Q5TG30 622 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 GKN2Q86XP6 184 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 BPIFB2Q8N4F0 458 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 KDF1Q8NAX2 398 aaPredicted RBP17.16■□□□□ 0.34
CMTM3-201ENST00000361909 CCNL2Q96S94 520 aaPredicted RBP17.16■□□□□ 0.34
CMTM3-201ENST00000361909 DNAJB12Q9NXW2 375 aaKnown RBP17.16■□□□□ 0.34
CMTM3-201ENST00000361909 DTX4Q9Y2E6 619 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 POMT1Q9Y6A1 747 aa17.16■□□□□ 0.34
CMTM3-201ENST00000361909 TMEM72A0PK05 275 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 PMELP40967 661 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 SNRPEP62304 92 aaKnown RBP17.15■□□□□ 0.34
CMTM3-201ENST00000361909 C1orf61Q13536 156 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 NKPD1Q17RQ9 610 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 C2orf76Q3KRA6 126 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 LRRC37A5PQ49AS3 106 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 FDX2Q6P4F2 183 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 C5orf46Q6UWT4 87 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 JAZF1Q86VZ6 243 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 ZSCAN1Q8NBB4 408 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 PATE1Q8WXA2 126 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 ACKR4Q9NPB9 350 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 FBXO34Q9NWN3 711 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 LPAR3Q9UBY5 353 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 MEIS3P1A6NDR6 274 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 TVP23AA6NH52 213 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 PSMD9O00233 223 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 ZNF10P21506 573 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-201ENST00000361909 ABCD3P28288 659 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 CAV2P51636 162 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 HNRNPKP61978 463 aaKnown RBP eCLIP17.15■□□□□ 0.34
CMTM3-201ENST00000361909 ATXN7L3Q14CW9 347 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-201ENST00000361909 HMGN3Q15651 99 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 TRMT12Q53H54 448 aaKnown RBP17.15■□□□□ 0.34
CMTM3-201ENST00000361909 LEG1Q6P5S2 330 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 TMEFF1Q8IYR6 380 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 OR13C8Q8NGS7 320 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 SLC22A8Q8TCC7 542 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 TINAGL1Q9GZM7 467 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-201ENST00000361909 SEC61A2Q9H9S3 476 aa17.15■□□□□ 0.34
CMTM3-201ENST00000361909 ABCA7Q8IZY2 2146 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 C2orf74A8MZ97 194 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 CRHP06850 196 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 ITGA5P08648 1049 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 SLC35G6P0C7Q6 338 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 ZNF888P0CJ79 500 aaPredicted RBP17.14■□□□□ 0.33
CMTM3-201ENST00000361909 PSMB6P28072 239 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 GRPRP30550 384 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 SLC6A9P48067 706 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 EIF5AP63241 154 aaKnown RBP17.14■□□□□ 0.33
CMTM3-201ENST00000361909 HHEXQ03014 270 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 FIGNL1Q6PIW4 674 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 ZNF561Q8N587 486 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 EXD3Q8N9H8 876 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 NUDCD2Q8WVJ2 157 aa17.14■□□□□ 0.33
CMTM3-201ENST00000361909 HOXB13Q92826 284 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms