RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 C20orf141Q9NUB4 165 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 A0A1W2PPV4 95 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 IDSB3KWA1 339 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 OLFM2O95897 454 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 ARG2P78540 354 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 CLEC1AQ8NC01 280 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 LIPHQ8WWY8 451 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 CPNE4Q96A23 557 aaPredicted RBP12.49□□□□□ -0.41
VCP-201ENST00000358901 C3orf49Q96BT1 292 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 PIGMQ9H3S5 423 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 OBP2BQ9NPH6 170 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 MBD1Q9UIS9 605 aaPredicted RBP12.49□□□□□ -0.41
VCP-201ENST00000358901 SIGLEC7Q9Y286 467 aa12.49□□□□□ -0.41
VCP-201ENST00000358901 MN1Q10571 1320 aaPredicted RBP12.49□□□□□ -0.41
VCP-201ENST00000358901 A0A1B0GUH1 482 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 A0A1W2PNR3 127 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 POU3F3P20264 500 aaPredicted RBP12.48□□□□□ -0.41
VCP-201ENST00000358901 C17orf107Q6ZR85 190 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 WDR5BQ86VZ2 330 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 KCNRGQ8N5I3 272 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 LINC01555Q8NAE3 123 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 SLC30A7Q8NEW0 376 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 OR1M1Q8NGA1 313 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 ST8SIA4Q92187 359 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 ATOH1Q92858 354 aaPredicted RBP12.48□□□□□ -0.41
VCP-201ENST00000358901 MRPL38Q96DV4 380 aaKnown RBP12.48□□□□□ -0.41
VCP-201ENST00000358901 ARHGDIGQ99819 225 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 TRAPPC2LQ9UL33 140 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 MMP17Q9ULZ9 603 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 PIGLQ9Y2B2 252 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 CCL27Q9Y4X3 112 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 CTGFP29279 349 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 PCBP3P57721 371 aaKnown RBP12.48□□□□□ -0.41
VCP-201ENST00000358901 LINC00303Q3SY05 128 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 STT3BQ8TCJ2 826 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 TCEAL7Q9BRU2 100 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 ABHD6Q9BV23 337 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 CSAG2Q9Y5P2 127 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 TRBV5-3A0A0A0MS03 114 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 SDHBP21912 280 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 GFERP55789 205 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 CARD18P57730 90 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 CAMK2BQ13554 666 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 HIST2H3PS2Q5TEC6 136 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 SHEQ5VZ18 495 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 CPEB2Q7Z5Q1 589 aaKnown RBP12.48□□□□□ -0.41
VCP-201ENST00000358901 BATF2Q8N1L9 274 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 OR52B4Q8NGK2 314 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 WDFY2Q96P53 400 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 NEU3Q9UQ49 428 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 B3GALT5Q9Y2C3 310 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 SLC17A4Q9Y2C5 497 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 PRSS37A4D1T9 235 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 ZNF705FA8MVS1 300 aaPredicted RBP12.48□□□□□ -0.41
VCP-201ENST00000358901 ZNF705DP0CH99 300 aaPredicted RBP12.48□□□□□ -0.41
VCP-201ENST00000358901 ZNF705BP0CI00 300 aaPredicted RBP12.48□□□□□ -0.41
VCP-201ENST00000358901 APOBEC1P41238 236 aaKnown RBP12.48□□□□□ -0.41
VCP-201ENST00000358901 SLC17A1Q14916 467 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 GPNMBQ14956 572 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 SFRP5Q5T4F7 317 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 ZNF547Q8IVP9 402 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 OR4C16Q8NGL9 310 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 OR4C3Q8NH37 302 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 OCSTAMPQ9BR26 566 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 CHST11Q9NPF2 352 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 SLCO1C1Q9NYB5 712 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 SERGEFQ9UGK8 458 aa12.48□□□□□ -0.41
VCP-201ENST00000358901 NXT1Q9UKK6 140 aaKnown RBP12.48□□□□□ -0.41
VCP-201ENST00000358901 OR6C6A6NF89 314 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 OTOL1A6NHN0 477 aaPredicted RBP12.47□□□□□ -0.41
VCP-201ENST00000358901 D6RAR5 112 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 MT-CO2P00403 227 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 GUSBP08236 651 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 SERPINF1P36955 418 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 RFX2P48378 723 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 LTC4SQ16873 150 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 NAXDQ8IW45 347 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 JAM3Q9BX67 310 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 PBX4Q9BYU1 374 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 LAT2Q9GZY6 243 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 PLEKHB1Q9UF11 243 aaPredicted RBP12.47□□□□□ -0.41
VCP-201ENST00000358901 KCND3Q9UK17 655 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 NOSIPQ9Y314 301 aaKnown RBP12.47□□□□□ -0.41
VCP-201ENST00000358901 SSC5DA1L4H1 1573 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 TRAV1-2A0A0B4J238 106 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 ZNF705GA8MUZ8 300 aaPredicted RBP12.47□□□□□ -0.41
VCP-201ENST00000358901 OR2F2O95006 317 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 IGHV3-9P01782 118 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 RPA2P15927 270 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 OR2F1Q13607 317 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 MSMO1Q15800 293 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 DMRTC1Q5HYR2 192 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 AVPI1Q5T686 147 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 LILRA6Q6PI73 481 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 ACOT7LQ6ZUV0 252 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 NLRC3Q7RTR2 1065 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 BPHLQ86WA6 291 aaPredicted RBP12.47□□□□□ -0.41
VCP-201ENST00000358901 YIPF5Q969M3 257 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 PELI1Q96FA3 418 aa12.47□□□□□ -0.41
VCP-201ENST00000358901 WDR89Q96FK6 387 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms