RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ALOX5APP20292 161 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 NOVP48745 357 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 HSPB2Q16082 182 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 TSTD1Q8NFU3 115 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 OR14J1Q9UGF5 321 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 CCDC187A0A096LP49 1063 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 XKRY2A2RUG3 117 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 FGF9P31371 208 aaPredicted RBP8.05□□□□□ -1.12
COL6A6-201ENST00000358511 UBE2MP61081 183 aaKnown RBP8.05□□□□□ -1.12
COL6A6-201ENST00000358511 CNKSR3Q6P9H4 555 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 PET117Q6UWS5 81 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 KDF1Q8NAX2 398 aaPredicted RBP8.05□□□□□ -1.12
COL6A6-201ENST00000358511 BVESQ8NE79 360 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 OR4C16Q8NGL9 310 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 LINC00052Q96N35 136 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 DBHP09172 617 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 FCGR2AP12318 317 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 HNF1AP20823 631 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 SLC6A1P30531 599 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 PTGER1P34995 402 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 PKIAP61925 76 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 PPP1CBP62140 327 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 C21orf62-AS1Q17RA5 79 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 GSG1Q2KHT4 349 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 NCR3LG1Q68D85 454 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 NPSR1Q6W5P4 371 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 DIO2Q92813 273 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 VN1R3Q9BXE9 311 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 SLC25A19Q9HC21 320 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 ABCA3Q99758 1704 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 SLC5A10A0PJK1 596 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 LINC00862A6NCI5 91 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 H3BQ06 376 aaPredicted RBP8.05□□□□□ -1.12
COL6A6-201ENST00000358511 PTGESO14684 152 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 B4GALT3O60512 393 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 AKR1C3P42330 323 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 ELLP55199 621 aaPredicted RBP8.05□□□□□ -1.12
COL6A6-201ENST00000358511 TOMM34Q15785 309 aaPredicted RBP8.05□□□□□ -1.12
COL6A6-201ENST00000358511 B3GNTL1Q67FW5 361 aaPredicted RBP8.05□□□□□ -1.12
COL6A6-201ENST00000358511 FBXL6Q8N531 539 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 ARRDC2Q8TBH0 407 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 AMDHD1Q96NU7 426 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 UCK1Q9HA47 277 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 SLC2A4RGQ9NR83 387 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 CASP8AP2Q9UKL3 1982 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 A0A1W2PP55 124 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 ANKRD30BLA7E2S9 258 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 SULT2B1O00204 365 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 S100A7P31151 101 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 PTGER4P35408 488 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 NKX2-1P43699 371 aaPredicted RBP8.05□□□□□ -1.12
COL6A6-201ENST00000358511 SLC35A1P78382 337 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 MEP1BQ16820 701 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 PRSS36Q5K4E3 855 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 EOGTQ5NDL2 527 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 TMEM207Q6UWW9 146 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 SLC16A13Q7RTY0 426 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 C9orf62Q8N4C0 152 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 PFN4Q8NHR9 129 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 NKX2-4Q9H2Z4 354 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 PLSCR1O15162 318 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 OR8G2PQ6IF36 304 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 OR52B4Q8NGK2 314 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 TEAD3Q99594 435 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 LMAN1LQ9HAT1 526 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 TUSC2O75896 110 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 MMP7P09237 267 aaPredicted RBP8.05□□□□□ -1.12
COL6A6-201ENST00000358511 CRYBB2P43320 205 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 LRRTM1Q86UE6 522 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 LMNTD1Q8N9Z9 388 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 DTD2Q96FN9 168 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 SLC6A18Q96N87 628 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 GLIPR2Q9H4G4 154 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 PPT2Q9UMR5 302 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 MCRIP1C9JLW8 97 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 DUX1O43812 170 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 ZIC2O95409 532 aaPredicted RBP8.05□□□□□ -1.12
COL6A6-201ENST00000358511 OLFM2O95897 454 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 PCBP4P57723 403 aaKnown RBP8.05□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF90Q03938 601 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 GUK1Q16774 197 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 ST3GAL2Q16842 350 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 SLC39A7Q92504 469 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 EMG1Q92979 244 aaKnown RBP8.05□□□□□ -1.12
COL6A6-201ENST00000358511 ADOQ96SZ5 270 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 PYCARD-AS1I3L0S3 204 aa8.04□□□□□ -1.12
COL6A6-201ENST00000358511 NTF3P20783 257 aa8.04□□□□□ -1.12
COL6A6-201ENST00000358511 PMS2P11Q13670 270 aa8.04□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF684Q5T5D7 378 aa8.04□□□□□ -1.12
COL6A6-201ENST00000358511 AGBL4Q5VU57 503 aa8.04□□□□□ -1.12
COL6A6-201ENST00000358511 OR14A16Q8NHC5 309 aa8.04□□□□□ -1.12
COL6A6-201ENST00000358511 DEFB118Q96PH6 123 aa8.04□□□□□ -1.12
COL6A6-201ENST00000358511 ULBP3Q9BZM4 244 aa8.04□□□□□ -1.12
COL6A6-201ENST00000358511 CSNK1G1Q9HCP0 422 aa8.04□□□□□ -1.12
COL6A6-201ENST00000358511 TAAR2Q9P1P5 351 aa8.04□□□□□ -1.12
COL6A6-201ENST00000358511 RPH3ALQ9UNE2 315 aa8.04□□□□□ -1.12
COL6A6-201ENST00000358511 SMAD6O43541 496 aaKnown RBP8.04□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF85Q03923 595 aa8.04□□□□□ -1.12
COL6A6-201ENST00000358511 CXorf58Q96LI9 332 aa8.04□□□□□ -1.12
COL6A6-201ENST00000358511 PAAF1Q9BRP4 392 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms