RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 AGPAT2O15120 278 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 FCGR2AP12318 317 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 APOBEC1P41238 236 aaKnown RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 PHF19Q5T6S3 580 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 ZFP41Q8N8Y5 198 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 STXBP6Q8NFX7 210 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 CMTM2Q8TAZ6 248 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 MVB12AQ96EY5 273 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 SLC35A4Q96G79 324 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 OBP2AQ9NY56 170 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 FASNP49327 2511 aaKnown RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 GFYI3L273 518 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 SPINT2O43291 252 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 BCL6P41182 706 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 GABREP78334 506 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 C11orf87Q6NUJ2 197 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 LRRC15Q8TF66 581 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 SLCO4A1Q96BD0 722 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 WFIKKN1Q96NZ8 548 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 IP6K3Q96PC2 410 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 OPALINQ96PE5 141 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 LMF1Q96S06 567 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 DUSP23Q9BVJ7 150 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 GCM1Q9NP62 436 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 CD84Q9UIB8 345 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 KIAA1551Q9HCM1 1747 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 SELENOFO60613 162 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 IL33O95760 270 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 TCTAP57738 103 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 PRAMEF19Q5SWL8 479 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 MRPL2Q5T653 305 aaKnown RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 OR7E24Q6IFN5 339 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 JMJD6Q6NYC1 403 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 DRAM2Q6UX65 266 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 VAMP8Q9BV40 100 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 NMES1Q9C002 83 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 CTDSPLO15194 276 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 GLSO94925 669 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 OR2B8PP59922 312 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 EIF3IQ13347 325 aaKnown RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 CATSPERDQ86XM0 798 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 OR5M9Q8NGP3 310 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 LPAR3Q9UBY5 353 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 MYOCOSA0A1B0GUC4 107 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 OR6C68A6NDL8 312 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 IL2RGP31785 369 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 SLC38A9Q8NBW4 561 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 NAA50Q9GZZ1 169 aaKnown RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 MARF1Q9Y4F3 1742 aaKnown RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 TCRBV5S2A0A599 114 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 CEBPZOSA8MTT3 80 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 CHST8Q9H2A9 424 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 GIMAP2Q9UG22 337 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 AK3Q9UIJ7 227 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 KCND3Q9UK17 655 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 ACAD8Q9UKU7 415 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 POLDIP2Q9Y2S7 368 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 A0A1W2PPH5 198 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 HMX2A2RU54 273 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 GLOD5A6NK44 160 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 HRO43593 1189 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 ZFAND5O76080 213 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 P2RX1P51575 399 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 CST9LP1Q5W188 147 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 PIANPQ8IYJ0 282 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 ARL6IP6Q8N6S5 226 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 TCTN2Q96GX1 697 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 OR1F2PQ96R84 312 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 NUDT16L1Q9BRJ7 211 aaKnown RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 SGPP1Q9BX95 441 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 ARV1Q9H2C2 271 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF98A6NK75 572 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 FAM3BP58499 235 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 EEF1A2Q05639 463 aaKnown RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 CALHM3Q86XJ0 350 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 OR51S1Q8NGJ8 323 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 EML6Q6ZMW3 1958 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 PQLC2LA1A4F0 135 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 TNFRSF10CO14798 259 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 PLPP2O43688 288 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 TBX18O95935 607 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 BMI1P35226 326 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 CSN1S1P47710 185 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 SMN1Q16637 294 aaKnown RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 AADACL3Q5VUY0 350 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 TXNDC8Q6A555 127 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 OGFOD3Q6PK18 319 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 OR4N2Q8NGD1 307 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 OR2AE1Q8NHA4 323 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 PPP1R1CQ8WVI7 109 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 MMABQ96EY8 250 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 B3GALT1Q9Y5Z6 326 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 TARM1B6A8C7 271 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 FPR2P25090 351 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 COL9A3Q14050 684 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 OR2T2Q6IF00 324 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 C16orf70Q9BSU1 422 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 KCNK12Q9HB15 430 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 A0A0B4J2A0 478 aa6.02□□□□□ -1.45
VPS13B-202ENST00000357162 NOVA1P51513 510 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms