RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 OTUD1Q5VV17 481 aaPredicted RBP13.57□□□□□ -0.24
CHD4-201ENST00000357008 OR8G2PQ6IF36 304 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 Q6ZRG5 221 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 UCN3Q969E3 161 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 PTDSS2Q9BVG9 487 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 PRRC2BQ5JSZ5 2229 aaKnown RBP13.57□□□□□ -0.24
CHD4-201ENST00000357008 UBR2Q8IWV8 1755 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 CATSPERDQ86XM0 798 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 BARHL1Q9BZE3 327 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 PLEKHA2Q9HB19 425 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 PDFQ9HBH1 243 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 MED9Q9NWA0 146 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 M0R082 166 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 SPINT2O43291 252 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 OR8U8P0C7N1 319 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 CHRNB4P30926 498 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 GOT1L1Q8NHS2 421 aaPredicted RBP13.56□□□□□ -0.24
CHD4-201ENST00000357008 KCNJ15Q99712 375 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 ZNF2Q9BSG1 426 aaPredicted RBP13.56□□□□□ -0.24
CHD4-201ENST00000357008 CCDC190Q86UF4 302 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 OR10J5Q8NHC4 309 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 DCTN6O00399 190 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 BCAT2O15382 392 aaPredicted RBP13.56□□□□□ -0.24
CHD4-201ENST00000357008 SELENBP1Q13228 472 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 RELL2Q8NC24 303 aaPredicted RBP13.56□□□□□ -0.24
CHD4-201ENST00000357008 HOXC11O43248 304 aaPredicted RBP13.56□□□□□ -0.24
CHD4-201ENST00000357008 ZIC2O95409 532 aaPredicted RBP13.56□□□□□ -0.24
CHD4-201ENST00000357008 ELLP55199 621 aaPredicted RBP13.56□□□□□ -0.24
CHD4-201ENST00000357008 ELAVL1Q15717 326 aaKnown RBP13.56□□□□□ -0.24
CHD4-201ENST00000357008 AANATQ16613 207 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 SYT13Q7L8C5 426 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 LINC01465Q8N7H1 131 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 ARIH2OSQ8N7S6 290 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 EMG1Q92979 244 aaKnown RBP13.56□□□□□ -0.24
CHD4-201ENST00000357008 UTP23Q9BRU9 249 aaKnown RBP13.56□□□□□ -0.24
CHD4-201ENST00000357008 SPNS1Q9H2V7 528 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 FLVCR1Q9Y5Y0 555 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 NRXN3Q9Y4C0 1643 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 ZNF732B4DXR9 585 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 AKR7A3O95154 331 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 RPL12P30050 165 aaKnown RBP13.56□□□□□ -0.24
CHD4-201ENST00000357008 RBP2P50120 134 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 ZNF85Q03923 595 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 TFAP2EQ6VUC0 442 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 SLC35G3Q8N808 338 aa13.56□□□□□ -0.24
CHD4-201ENST00000357008 CROCCQ5TZA2 2017 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 IGLV3-25P01717 112 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 SLC38A9Q8NBW4 561 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 INTS12Q96CB8 462 aaKnown RBP13.55□□□□□ -0.24
CHD4-201ENST00000357008 CALHM2Q9HA72 323 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 RPA2P15927 270 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 UBE2MP61081 183 aaKnown RBP13.55□□□□□ -0.24
CHD4-201ENST00000357008 MAML2Q8IZL2 1156 aaPredicted RBP13.55□□□□□ -0.24
CHD4-201ENST00000357008 SLAMF6Q96DU3 332 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 OR6C1Q96RD1 312 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 ATF6BQ99941 703 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 H3BQ06 376 aaPredicted RBP13.55□□□□□ -0.24
CHD4-201ENST00000357008 ZNF354AO60765 605 aaPredicted RBP13.55□□□□□ -0.24
CHD4-201ENST00000357008 HSF1Q00613 529 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 C2orf76Q3KRA6 126 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 MFSD4AQ8N468 514 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 OR13C5Q8NGS8 318 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 FAM234AQ9H0X4 552 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 FN3KRPQ9HA64 309 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 CHRNA9Q9UGM1 479 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 ZNF346Q9UL40 294 aaKnown RBP13.55□□□□□ -0.24
CHD4-201ENST00000357008 CD3DP04234 171 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 METTL15P1P0C7V9 234 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 ABOP16442 354 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 EPHA2P29317 976 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 SOX18P35713 384 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 KIR2DL3P43628 341 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 P2RX3P56373 397 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 ZBTB37Q5TC79 503 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 FAAP20Q6NZ36 180 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 PLXDC2Q6UX71 529 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 STAC2Q6ZMT1 411 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.55□□□□□ -0.24
CHD4-201ENST00000357008 OR51E1Q8TCB6 317 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 ZFPM2Q8WW38 1151 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 NEURL2Q9BR09 285 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 PLSCR3Q9NRY6 295 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 TRAPPC4Q9Y296 219 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 OR6C68A6NDL8 312 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 E5RGE8 158 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 TNFRSF10CO14798 259 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 PRPH2P23942 346 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 SNRPNP63162 240 aaKnown RBP13.55□□□□□ -0.24
CHD4-201ENST00000357008 SSBP1Q04837 148 aaKnown RBP13.55□□□□□ -0.24
CHD4-201ENST00000357008 ACKR1Q16570 336 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 OR51H1Q8NH63 302 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 SMIM4Q8WVI0 70 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 TMEM231Q9H6L2 316 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 CHST11Q9NPF2 352 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 ZNF331Q9NQX6 463 aaPredicted RBP13.55□□□□□ -0.24
CHD4-201ENST00000357008 NSG2Q9Y328 171 aa13.55□□□□□ -0.24
CHD4-201ENST00000357008 FCMRO60667 390 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 CER1O95813 267 aa13.54□□□□□ -0.24
CHD4-201ENST00000357008 PDGFBP01127 241 aaPredicted RBP13.54□□□□□ -0.24
CHD4-201ENST00000357008 HMGA1P17096 107 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms