RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 RTL6Q6ICC9 239 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 TUBA1AQ71U36 451 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 MEPCEQ7L2J0 689 aaKnown RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 CLVS1Q8IUQ0 354 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 NANOGP1Q8N7R0 232 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 WDSUB1Q8N9V3 476 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 RELL2Q8NC24 303 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 OR5M9Q8NGP3 310 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 OR2T4Q8NH00 348 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 OR51A7Q8NH64 312 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 TMEM158Q8WZ71 300 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 LGALS12Q96DT0 336 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 YIPF6Q96EC8 236 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 KTI12Q96EK9 354 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 RNFT2Q96EX2 444 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 TNFRSF13CQ96RJ3 184 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 CNN2Q99439 309 aaKnown RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 DDOQ99489 341 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 PIGQQ9BRB3 760 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 TAPBPLQ9BX59 468 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 HINT3Q9NQE9 182 aaKnown RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 NDUFB11Q9NX14 153 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 QPCTLQ9NXS2 382 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 BOKQ9UMX3 212 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 CAB39Q9Y376 341 aaPredicted RBP6.15□□□□□ -1.42
VPS13A-201ENST00000355766 NOX1Q9Y5S8 564 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 A3GALT2U3KPV4 340 aa6.15□□□□□ -1.42
VPS13A-201ENST00000355766 MPDZO75970 2070 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 CUBNO60494 3623 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 ANK3Q12955 4377 aaKnown RBP6.14□□□□□ -1.43
VPS13A-201ENST00000355766 TMEM72A0PK05 275 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 CCDC160A6NGH7 325 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 LIPT2A6NK58 231 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 MCIDASD6RGH6 385 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 H3BMQ9 156 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 CCRL2O00421 344 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 XKRYO14609 159 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 PHYHO14832 338 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 EIF1BO60739 113 aaKnown RBP6.14□□□□□ -1.43
VPS13A-201ENST00000355766 WDR1O75083 606 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 INMTO95050 263 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 PPP1R3DO95685 299 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 PMS2P2O95744 297 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 PTHP01270 115 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 P04436 131 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 CD1AP06126 327 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 OR2T7P0C7T2 308 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 PSMB9P28065 219 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 RGS6P49758 472 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 DIO1P49895 249 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 NUDT6P53370 316 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 RPL18Q07020 188 aaKnown RBP6.14□□□□□ -1.43
VPS13A-201ENST00000355766 PUDPQ08623 228 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 FOXF1Q12946 379 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 TPBGQ13641 420 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 PON3Q15166 354 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 TRAM1Q15629 374 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 CTF1Q16619 201 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 HYAL4Q2M3T9 481 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 TM4SF20Q53R12 229 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 C1orf185Q5T7R7 199 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 PLBD1Q6P4A8 553 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 PRSS57Q6UWY2 283 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 TMPRSS11AQ6ZMR5 421 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 H1FNTQ75WM6 255 aaPredicted RBP6.14□□□□□ -1.43
VPS13A-201ENST00000355766 PXKQ7Z7A4 578 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 JAZF1Q86VZ6 243 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 CPOQ8IVL8 374 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 SYS1Q8N2H4 156 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 ACBD7Q8N6N7 88 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 C10orf53Q8N6V4 93 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 ARIH2OSQ8N7S6 290 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 SLC37A3Q8NCC5 494 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 ZNF485Q8NCK3 441 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 NPEPL1Q8NDH3 523 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 KBTBD8Q8NFY9 601 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 OR52I1Q8NGK6 324 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 OR1J4Q8NGS1 313 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 OR2T27Q8NH04 317 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 RNASE6Q93091 150 aaKnown RBP6.14□□□□□ -1.43
VPS13A-201ENST00000355766 TAAR8Q969N4 342 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 LRRC46Q96FV0 321 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 DACH2Q96NX9 599 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 MOGAT1Q96PD6 335 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 ERMAPQ96PL5 475 aaPredicted RBP6.14□□□□□ -1.43
VPS13A-201ENST00000355766 TSC22D3Q99576 134 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 MGLLQ99685 303 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 KATNB1Q9BVA0 655 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 FUNDC2Q9BWH2 189 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 OR2B2Q9GZK3 357 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 DEFB127Q9H1M4 99 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 OR10A2Q9H208 303 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 TXNIPQ9H3M7 391 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 ZDHHC11Q9H8X9 412 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 GALNT9Q9HCQ5 603 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 INIPQ9NRY2 104 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 VSX1Q9NZR4 365 aaPredicted RBP6.14□□□□□ -1.43
VPS13A-201ENST00000355766 GRHPRQ9UBQ7 328 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 LIPGQ9Y5X9 500 aa6.14□□□□□ -1.43
VPS13A-201ENST00000355766 FKBP7Q9Y680 259 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms