RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 PHF3Q92576 2039 aaKnown RBP22.78■■□□□ 1.24
CLK2-201ENST00000355560 OR5H15A6NDH6 313 aa22.78■■□□□ 1.24
CLK2-201ENST00000355560 RAF1P04049 648 aa22.78■■□□□ 1.24
CLK2-201ENST00000355560 CSF3P09919 207 aa22.78■■□□□ 1.24
CLK2-201ENST00000355560 PRKAR1AP10644 381 aa22.78■■□□□ 1.24
CLK2-201ENST00000355560 SNRPBP14678 240 aaKnown RBP22.78■■□□□ 1.24
CLK2-201ENST00000355560 NOVA1P51513 510 aaKnown RBP22.78■■□□□ 1.24
CLK2-201ENST00000355560 TMEM123Q8N131 208 aa22.78■■□□□ 1.24
CLK2-201ENST00000355560 ZIC4Q8N9L1 334 aa22.78■■□□□ 1.24
CLK2-201ENST00000355560 BRD7Q9NPI1 651 aa22.78■■□□□ 1.24
CLK2-201ENST00000355560 ABRACLQ9P1F3 81 aa22.78■■□□□ 1.24
CLK2-201ENST00000355560 GDF2Q9UK05 429 aaPredicted RBP22.78■■□□□ 1.24
CLK2-201ENST00000355560 TBC1D24Q9ULP9 559 aa22.78■■□□□ 1.24
CLK2-201ENST00000355560 TRBV5-7A0A0A0MS05 114 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 A0A1W2PQ09 198 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 ANKRD61A6NGH8 418 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 FAM166BA8MTA8 275 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 CELA3AP09093 270 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 CEACAM1P13688 526 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 SELENOPP49908 381 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 RRADP55042 308 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 CLDN15P56746 228 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 PHYHD1Q5SRE7 291 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 CFAP77Q6ZQR2 320 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 GALNTL5Q7Z4T8 443 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 MDS2Q8NDY4 140 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 OR5H6Q8NGV6 325 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 TMEM54Q969K7 222 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 CYSLTR2Q9NS75 346 aa22.77■■□□□ 1.24
CLK2-201ENST00000355560 TMEM269A0A1B0GVZ9 245 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 HPNP05981 417 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 TALDO1P37837 337 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 OR10S1Q8NGN2 331 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 OR2AJ1Q8NGZ0 328 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 ASH2LQ9UBL3 628 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 IFITM5A6NNB3 132 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 SP1P08047 785 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 NPR2P20594 1047 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 PTBP1P26599 531 aaKnown RBP eCLIP22.76■■□□□ 1.23
CLK2-201ENST00000355560 MAGEA5P43359 124 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 IGF2-ASQ6U949 168 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 ROBO4Q8WZ75 1007 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 THRSPQ92748 146 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 G6PC2Q9NQR9 355 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 KLF13Q9Y2Y9 288 aaPredicted RBP22.76■■□□□ 1.23
CLK2-201ENST00000355560 V9GY05 133 aa22.76■■□□□ 1.23
CLK2-201ENST00000355560 TRAV8-7A0A075B6U6 113 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 LINC01387J3KSC0 135 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 AIPO00170 330 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 NKX2-8O15522 239 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 NME2P1O60361 137 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 NME2P22392 152 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 HES5Q5TA89 166 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 Q8N402 240 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 OR4M1Q8NGD0 313 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 ZNF671Q8TAW3 534 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 PNPLA2Q96AD5 504 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 ZNF775Q96BV0 537 aaPredicted RBP22.75■■□□□ 1.23
CLK2-201ENST00000355560 OR52A1Q9UKL2 312 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 FUOMA2VDF0 154 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 PLGLB1Q02325 96 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 SCN1BQ07699 218 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 TAB1Q15750 504 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 KCNMB1Q16558 191 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 C10orf128Q5T292 105 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 SLC25A25Q6KCM7 469 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 SETD6Q8TBK2 473 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 COL25A1Q9BXS0 654 aaPredicted RBP22.75■■□□□ 1.23
CLK2-201ENST00000355560 FOXD3Q9UJU5 478 aaPredicted RBP22.75■■□□□ 1.23
CLK2-201ENST00000355560 CLEC4AQ9UMR7 237 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 FLVCR1Q9Y5Y0 555 aa22.75■■□□□ 1.23
CLK2-201ENST00000355560 ASPMQ8IZT6 3477 aa22.74■■□□□ 1.23
CLK2-201ENST00000355560 ADRA2CP18825 462 aa22.74■■□□□ 1.23
CLK2-201ENST00000355560 CDC20Q12834 499 aa22.74■■□□□ 1.23
CLK2-201ENST00000355560 RIN1Q13671 783 aa22.74■■□□□ 1.23
CLK2-201ENST00000355560 ABLIM2Q6H8Q1 611 aa22.74■■□□□ 1.23
CLK2-201ENST00000355560 LRRTM1Q86UE6 522 aa22.74■■□□□ 1.23
CLK2-201ENST00000355560 TMEM251Q8N6I4 163 aa22.74■■□□□ 1.23
CLK2-201ENST00000355560 LGALS14Q8TCE9 139 aa22.74■■□□□ 1.23
CLK2-201ENST00000355560 CPNE4Q96A23 557 aaPredicted RBP22.74■■□□□ 1.23
CLK2-201ENST00000355560 IRF2BPLQ9H1B7 796 aa22.74■■□□□ 1.23
CLK2-201ENST00000355560 DHDHQ9UQ10 334 aa22.74■■□□□ 1.23
CLK2-201ENST00000355560 ZNF716A6NP11 495 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 TM4SF5O14894 197 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 MAS1P04201 325 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 MEOX1P50221 254 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 MMP16P51512 607 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 ZNF133P52736 654 aaPredicted RBP22.73■■□□□ 1.23
CLK2-201ENST00000355560 KLHL24Q6TFL4 600 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 TMPRSS7Q7RTY8 843 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 ZNF845Q96IR2 970 aaPredicted RBP22.73■■□□□ 1.23
CLK2-201ENST00000355560 SPATA2Q9UM82 520 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 A0A0G2JMP0 313 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 A0A0X1KG70 313 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 A0A1B0GVC2 190 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 A6NIN4 97 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 ZNF878C9JN71 531 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 DOK2O60496 412 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 APOA1P02647 267 aa22.73■■□□□ 1.23
CLK2-201ENST00000355560 GUCA1AP43080 201 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms