RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 SYT14P1Q58G82 188 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 PRAMEF5Q5TYX0 476 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 PRAMEF6Q5VXH4 476 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 USP51Q70EK9 711 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 FAM185AQ8N0U4 392 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 OR10X1Q8NGY0 326 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 GON7Q9BXV9 100 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 HES7Q9BYE0 225 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 K7EQM0 130 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 SH2D1BO14796 132 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 PRKNO60260 465 aaPredicted RBP16.45■□□□□ 0.22
COL18A1-202ENST00000355480 IGLV3-27P01718 113 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 EMP3P54852 163 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 HTR4Q13639 388 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 ZNF626Q68DY1 528 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 TFAP2EQ6VUC0 442 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 UBE2FQ969M7 185 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 MVB12AQ96EY5 273 aa16.45■□□□□ 0.22
COL18A1-202ENST00000355480 ACVR1Q04771 509 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 OR2L13Q8N349 312 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 MZB1Q8WU39 189 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 PLK3Q9H4B4 646 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 TRABD2BA6NFA1 517 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 AQP7O14520 342 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 PMS2P2O95744 297 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 FABP1P07148 127 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 OR1M1Q8NGA1 313 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 OR6C65A6NJZ3 312 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 M0R135 149 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 SIRPB1O00241 398 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 YIF1AO95070 293 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 FAM157BP0CG42 384 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 CNR1P21554 472 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 FOXC1Q12948 553 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 ZNF385BQ569K4 471 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 OR51A4Q8NGJ6 313 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 ST8SIA1Q92185 356 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 ZNF799Q96GE5 643 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 OPALINQ96PE5 141 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 ACER3Q9NUN7 267 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 IGHV3-15A0A0B4J1V0 119 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 GLRA1P23415 457 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 EMC4Q5J8M3 183 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 ARSGQ96EG1 525 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 POFUT1Q9H488 388 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 TNFSF11O14788 317 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 PRSS45Q7RTY3 260 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 ZNF439Q8NDP4 499 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 SLC25A21Q9BQT8 299 aaPredicted RBP16.44■□□□□ 0.22
COL18A1-202ENST00000355480 CTSFQ9UBX1 484 aa16.44■□□□□ 0.22
COL18A1-202ENST00000355480 CXCL10P02778 98 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 SPI1P17947 270 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 LIPAP38571 399 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 CCR2P41597 374 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 CCDC71Q8IV32 467 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-202ENST00000355480 ARIH2OSQ8N7S6 290 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 TMEM99Q8N816 258 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 KIAA1456Q9P272 454 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 FABP7O15540 132 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 TBPP20226 339 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 M6PRP20645 277 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 CASP3P42574 277 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 C15orf54Q8N8G6 183 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-202ENST00000355480 NOVA1P51513 510 aaKnown RBP16.43■□□□□ 0.22
COL18A1-202ENST00000355480 NANOGP1Q8N7R0 232 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 C11orf54Q9H0W9 315 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-202ENST00000355480 MOB1AQ9H8S9 216 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 LTB4R2Q9NPC1 389 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 MYF5P13349 255 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 ZNF26P17031 533 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-202ENST00000355480 UBE2G2P60604 165 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 RPL18Q07020 188 aaKnown RBP16.43■□□□□ 0.22
COL18A1-202ENST00000355480 KMT5CQ86Y97 462 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 FAM109AQ8N4B1 249 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 GPR78Q96P69 363 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 TFAP2AP05549 437 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 OR2AE1Q8NHA4 323 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 SEH1LQ96EE3 360 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 OXGR1Q96P68 337 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 ZPBPQ9BS86 351 aa16.43■□□□□ 0.22
COL18A1-202ENST00000355480 DVL1O14640 695 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 FCMRO60667 390 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 SLC2A10O95528 541 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 DVL1P1P54792 670 aaPredicted RBP16.42■□□□□ 0.22
COL18A1-202ENST00000355480 FAM199XQ6PEV8 388 aaPredicted RBP16.42■□□□□ 0.22
COL18A1-202ENST00000355480 ZNF620Q6ZNG0 422 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 OR51S1Q8NGJ8 323 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 OR6K3Q8NGY3 331 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 SLCO4A1Q96BD0 722 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 ZNF195O14628 629 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 CRYZL1O95825 349 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 CTSLP07711 333 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 CCR9P51686 369 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 SOWAHCQ53LP3 525 aaPredicted RBP16.42■□□□□ 0.22
COL18A1-202ENST00000355480 AGBL4Q5VU57 503 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 RNF141Q8WVD5 230 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 PURGQ9UJV8 347 aaKnown RBP16.42■□□□□ 0.22
COL18A1-202ENST00000355480 CEACAM5P06731 702 aa16.42■□□□□ 0.22
COL18A1-202ENST00000355480 ADH4P08319 380 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms