RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SLC26A1Q9H2B4 701 aa19.91■□□□□ 0.78
NKX2-1-201ENST00000354822 TAS2R4Q9NYW5 299 aa19.91■□□□□ 0.78
NKX2-1-201ENST00000354822 PCDHGA5Q9Y5G8 931 aa19.91■□□□□ 0.78
NKX2-1-201ENST00000354822 U3KQ87 197 aa19.91■□□□□ 0.78
NKX2-1-201ENST00000354822 LY6G6EA0A0G2JKS1 128 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 TMEM269A0A1B0GVZ9 245 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 ERVH48-1M5A8F1 160 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 UBCP0CG48 685 aaKnown RBP19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 FMODQ06828 376 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 PMS2CLQ68D20 193 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 ZNF626Q68DY1 528 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 FOXRED1Q96CU9 486 aaPredicted RBP19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 SORCS2Q96PQ0 1159 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 U3KQA8 63 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 A0A0A6YYH2 397 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 A6NJ64 397 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 SIGLEC6O43699 453 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 WNT11O96014 354 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 H2BFMP0C1H6 154 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 AKAIN1P0CW23 69 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 MMP16P51512 607 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 FAAP20Q6NZ36 180 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 WDR5BQ86VZ2 330 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 BPHLQ86WA6 291 aaPredicted RBP19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 ADPRHL1Q8NDY3 354 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 RNF133Q8WVZ7 376 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 SPSB2Q99619 263 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 METTL7AQ9H8H3 244 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 MED29Q9NX70 200 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 WIF1Q9Y5W5 379 aa19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 TNRC6BQ9UPQ9 1833 aaKnown RBP19.9■□□□□ 0.78
NKX2-1-201ENST00000354822 SELENOPP49908 381 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 ACTBP60709 375 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 ACTG1P63261 375 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 PLPPR5Q32ZL2 321 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 LGALSLQ3ZCW2 172 aaPredicted RBP19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 GLYATL3Q5SZD4 288 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 THEM4Q5T1C6 240 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 FAM69BQ5VUD6 431 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 NKAIN3Q8N8D7 197 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 OR10H5Q8NGA6 315 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 OR4C16Q8NGL9 310 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 NAT6Q93015 286 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 CCDC74BQ96LY2 380 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 SEC22CQ9BRL7 303 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 KLHL13Q9P2N7 655 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 EIF3KQ9UBQ5 218 aaKnown RBP19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 ZNF69Q9UC07 566 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 FREM3P0C091 2139 aa19.89■□□□□ 0.77
NKX2-1-201ENST00000354822 LOC107986453A0A1B0GWG9 222 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 H3BML4 177 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 ANXA7P20073 488 aaKnown RBP19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 SDHBP21912 280 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 C19orf57Q0VDD7 668 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 IKZF1Q13422 519 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 LYPD8Q6UX82 237 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 OR6N1Q8NGY5 312 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 PTX4Q96A99 478 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 MGAT4CQ9UBM8 478 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 SDK1Q7Z5N4 2213 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 GIPP09681 153 aaPredicted RBP19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 GTF2F2P13984 249 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 GABRA1P14867 456 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 C4BPBP20851 252 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 PTGDSP41222 190 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 BIDP55957 195 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 FAM198BQ6UWH4 519 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 LINC00346Q8IVM7 164 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 GPX8Q8TED1 209 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 IRF2BPLQ9H1B7 796 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 CLEC4MQ9H2X3 399 aaPredicted RBP19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 SLCO5A1Q9H2Y9 848 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 SCPEP1Q9HB40 452 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 PILRBQ9UKJ0 227 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 USP34Q70CQ2 3546 aa19.88■□□□□ 0.77
NKX2-1-201ENST00000354822 EFNA2O43921 213 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 FKBP2P26885 142 aaKnown RBP19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 MYBPHQ13203 477 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 C1orf100Q5SVJ3 147 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 BIVMQ86UB2 503 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 ZNF680Q8NEM1 530 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 GINS4Q9BRT9 223 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 CENPMQ9NSP4 180 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 B3GALT1Q9Y5Z6 326 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 IGKV1D-43A0A0B4J1Z2 117 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 LOC390937A0A1W2PQ73 354 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 UBE2QL1A1L167 161 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 NOS1APO75052 506 aaPredicted RBP19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 OR2J2O76002 312 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 PSMA6P60900 246 aaKnown RBP19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 RAP2BP61225 183 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 C3orf33Q6P1S2 294 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 KLHL24Q6TFL4 600 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 NHLRC1Q6VVB1 395 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 HDDC2Q7Z4H3 204 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 ADGRE4PQ86SQ3 457 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 OR10G3Q8NGC4 313 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 POC1BQ8TC44 478 aa19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 MRPL13Q9BYD1 178 aaKnown RBP19.87■□□□□ 0.77
NKX2-1-201ENST00000354822 HEXA-AS1Q9H8Q6 139 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms