RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 MT-ND5P03915 603 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 ERFP50548 548 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 PSG7Q13046 419 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 SCGB2A2Q13296 93 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 CDK5R2Q13319 367 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 TAF11Q15544 211 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 VTCN1Q7Z7D3 282 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 NRMQ8IXM6 262 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 SLC15A3Q8IY34 581 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 DEFB107AQ8IZN7 70 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 OFCC1Q8IZS5 231 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 DEFB108BQ8NET1 73 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 OR13C2Q8NGS9 318 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 C22orf15Q8WYQ4 148 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 TIMD4Q96H15 378 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 RBM4Q9BWF3 364 aaKnown RBP13.39□□□□□ -0.27
PDGFA-201ENST00000354513 EMC7Q9NPA0 242 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 POLE4Q9NR33 117 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 CMTM6Q9NX76 183 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 ADA2Q9NZK5 511 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 RHCGQ9UBD6 479 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 AP3M1Q9Y2T2 418 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 TRRAPQ9Y4A5 3859 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 A0A1W2PPL8 197 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 SPRY1O43609 319 aaPredicted RBP13.39□□□□□ -0.27
PDGFA-201ENST00000354513 YAP1P46937 504 aaKnown RBP13.39□□□□□ -0.27
PDGFA-201ENST00000354513 SEC61A1P61619 476 aaKnown RBP13.39□□□□□ -0.27
PDGFA-201ENST00000354513 SELENOWP63302 87 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 PRKCDQ05655 676 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 ST3GAL3Q11203 375 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 OTPQ5XKR4 325 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 TSEN54Q7Z6J9 526 aaKnown RBP13.39□□□□□ -0.27
PDGFA-201ENST00000354513 TPD52L3Q96J77 140 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 C4orf45Q96LM5 186 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 SIGLEC11Q96RL6 698 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 SUCNR1Q9BXA5 334 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 C1orf21Q9H246 121 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 C7orf69Q9H7B7 122 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 SPAG4Q9NPE6 437 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 MMP26Q9NRE1 261 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 TAS2R1Q9NYW7 299 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 EIF3KQ9UBQ5 218 aaKnown RBP13.39□□□□□ -0.27
PDGFA-201ENST00000354513 CGGBP1Q9UFW8 167 aaPredicted RBP13.39□□□□□ -0.27
PDGFA-201ENST00000354513 ADAM18Q9Y3Q7 739 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 TIMM10BQ9Y5J6 103 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 NPTNQ9Y639 398 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 PLSCR5A0PG75 271 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 ISPDA4D126 451 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 F5H0A9 414 aaPredicted RBP13.38□□□□□ -0.27
PDGFA-201ENST00000354513 TRAPPC2LH3BP13 241 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 NME4O00746 187 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 CDC42EP2O14613 210 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 NR2C1P13056 603 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 MSR1P21757 451 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 GATA3P23771 443 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 UBA52P62987 128 aaKnown RBP13.38□□□□□ -0.27
PDGFA-201ENST00000354513 LIPEQ05469 1076 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 AWAT1Q58HT5 328 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 MESTQ5EB52 335 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 MTX3Q5HYI7 312 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 KLF17Q5JT82 389 aaPredicted RBP13.38□□□□□ -0.27
PDGFA-201ENST00000354513 FAM122BQ7Z309 247 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 TEX29Q8N6K0 151 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 ZNF283Q8N7M2 679 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 OR51A7Q8NH64 312 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 NANPQ8TBE9 248 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 GCDHQ92947 438 aaPredicted RBP13.38□□□□□ -0.27
PDGFA-201ENST00000354513 SLC7A6OSQ96CW6 309 aaPredicted RBP13.38□□□□□ -0.27
PDGFA-201ENST00000354513 C1orf147Q96MC9 270 aaPredicted RBP13.38□□□□□ -0.27
PDGFA-201ENST00000354513 CDRT15Q96T59 188 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 CYSLTR2Q9NS75 346 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 UBAP1Q9NZ09 502 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 ABCD2Q9UBJ2 740 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 ZDHHC8Q9ULC8 765 aa13.38□□□□□ -0.27
PDGFA-201ENST00000354513 PPIAL4EA0A075B759 164 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 A0A087WUU8 490 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 PPIAL4CA0A0B4J2A2 164 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 PPIAL4DF5H284 164 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 IMPA2O14732 288 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 GYG2O15488 501 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 PPIAL4FP0DN26 164 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 LIMS1P48059 325 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 RASSF2P50749 326 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 TNFAIP6P98066 277 aaPredicted RBP13.37□□□□□ -0.27
PDGFA-201ENST00000354513 FAM205BPQ63HN1 556 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 TBPL2Q6SJ96 375 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 SYT9Q86SS6 491 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 C1orf174Q8IYL3 243 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 FAM156AQ8NDB6 213 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 OR2T12Q8NG77 320 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 FNDC8Q8TC99 324 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 SLC7A6Q92536 515 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 Q96M85 177 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 RBP7Q96R05 134 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 BTBD10Q9BSF8 475 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 C1QTNF5Q9BXJ0 243 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 EGLN1Q9GZT9 426 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 TMEM106BQ9NUM4 274 aa13.37□□□□□ -0.27
PDGFA-201ENST00000354513 PURGQ9UJV8 347 aaKnown RBP13.37□□□□□ -0.27
PDGFA-201ENST00000354513 POLR3KQ9Y2Y1 108 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms