RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 SMAP2Q8WU79 429 aaPredicted RBP19.23■□□□□ 0.67
SHMT1-203ENST00000354098 ZNF582Q96NG8 517 aaPredicted RBP19.23■□□□□ 0.67
SHMT1-203ENST00000354098 MARCH7Q9H992 704 aa19.23■□□□□ 0.67
SHMT1-203ENST00000354098 SPARCP09486 303 aa19.22■□□□□ 0.67
SHMT1-203ENST00000354098 ENTPD1P49961 510 aa19.22■□□□□ 0.67
SHMT1-203ENST00000354098 HIST1H3AP68431 136 aa19.22■□□□□ 0.67
SHMT1-203ENST00000354098 SCRN3Q0VDG4 424 aa19.22■□□□□ 0.67
SHMT1-203ENST00000354098 CCDC92Q53HC0 331 aaPredicted RBP19.22■□□□□ 0.67
SHMT1-203ENST00000354098 HIST2H3PS2Q5TEC6 136 aa19.22■□□□□ 0.67
SHMT1-203ENST00000354098 TTC23Q5W5X9 447 aa19.22■□□□□ 0.67
SHMT1-203ENST00000354098 CFAP77Q6ZQR2 320 aa19.22■□□□□ 0.67
SHMT1-203ENST00000354098 HIST2H3AQ71DI3 136 aa19.22■□□□□ 0.67
SHMT1-203ENST00000354098 DEPDC4Q8N2C3 294 aa19.22■□□□□ 0.67
SHMT1-203ENST00000354098 INTS14Q96SY0 518 aa19.22■□□□□ 0.67
SHMT1-203ENST00000354098 TMEM204Q9BSN7 226 aa19.22■□□□□ 0.67
SHMT1-203ENST00000354098 WACQ9BTA9 647 aa19.22■□□□□ 0.67
SHMT1-203ENST00000354098 HRNRQ86YZ3 2850 aaPredicted RBP19.22■□□□□ 0.67
SHMT1-203ENST00000354098 SGCEO43556 437 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 ENTPD6O75354 484 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 GNAO1P09471 354 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 CAPGP40121 348 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 NAA10P41227 235 aaPredicted RBP19.21■□□□□ 0.67
SHMT1-203ENST00000354098 PLP2Q04941 152 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 PCK2Q16822 640 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 ZNF691Q5VV52 312 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 TMEM154Q6P9G4 183 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 VASH1Q7L8A9 365 aaPredicted RBP19.21■□□□□ 0.67
SHMT1-203ENST00000354098 SLC30A7Q8NEW0 376 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 KBTBD8Q8NFY9 601 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 OR6N2Q8NGY6 317 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 OR2AJ1Q8NGZ0 328 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 RHOXF1Q8NHV9 184 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 MAP6Q96JE9 813 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 CLEC4MQ9H2X3 399 aaPredicted RBP19.21■□□□□ 0.67
SHMT1-203ENST00000354098 VCX3BQ9H321 246 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 KCNG2Q9UJ96 466 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 GDF2Q9UK05 429 aaPredicted RBP19.21■□□□□ 0.67
SHMT1-203ENST00000354098 RNF115Q9Y4L5 304 aa19.21■□□□□ 0.67
SHMT1-203ENST00000354098 IQCMA0A1B0GVH7 501 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 ATP6V1G2-DDX39BF2Z307 99 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 H0YJX3 145 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 DOK2O60496 412 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 GOSR1O95249 250 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 MRPL3P09001 348 aaKnown RBP19.2■□□□□ 0.66
SHMT1-203ENST00000354098 CDH11P55287 796 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 TEX30Q5JUR7 227 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 DPY19L4Q7Z388 723 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 TMEM200AQ86VY9 491 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 GID4Q8IVV7 300 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 PAQR4Q8N4S7 273 aaPredicted RBP19.2■□□□□ 0.66
SHMT1-203ENST00000354098 GJC3Q8NFK1 279 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 LILRB1Q8NHL6 650 aaPredicted RBP19.2■□□□□ 0.66
SHMT1-203ENST00000354098 NEUROG1Q92886 237 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 APOL4Q9BPW4 351 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 ASH1LQ9NR48 2969 aaKnown RBP19.2■□□□□ 0.66
SHMT1-203ENST00000354098 PLEK2Q9NYT0 353 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 FBXL3Q9UKT7 428 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 FBN2P35556 2912 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 LOC100509620A0A075B734 347 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 IGHV2OR16-5A0A0B4J2B6 119 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 SHISA9B4DS77 424 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 H0YAE9 185 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 CRYAAP02489 173 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 STOMP27105 288 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 SSTR2P30874 369 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 HCCSP53701 268 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 SLC25A30Q5SVS4 291 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 C6orf52Q5T4I8 152 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 LCN1P1Q5VSP4 162 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 SLC22A25Q6T423 547 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 IZUMO2Q6UXV1 221 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 ALDH16A1Q8IZ83 802 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 TFAP2CQ92754 450 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 RADILQ96JH8 1075 aa19.2■□□□□ 0.66
SHMT1-203ENST00000354098 CADP27708 2225 aa19.19■□□□□ 0.66
SHMT1-203ENST00000354098 SLC22A31A6NKX4 558 aa19.19■□□□□ 0.66
SHMT1-203ENST00000354098 SYNGR3O43761 229 aa19.19■□□□□ 0.66
SHMT1-203ENST00000354098 ZNF35P13682 527 aa19.19■□□□□ 0.66
SHMT1-203ENST00000354098 HTR1FP30939 366 aa19.19■□□□□ 0.66
SHMT1-203ENST00000354098 KRTAP10-9P60411 292 aa19.19■□□□□ 0.66
SHMT1-203ENST00000354098 IL5RAQ01344 420 aa19.19■□□□□ 0.66
SHMT1-203ENST00000354098 OCLNQ16625 522 aa19.19■□□□□ 0.66
SHMT1-203ENST00000354098 ZNF704Q6ZNC4 412 aaPredicted RBP19.19■□□□□ 0.66
SHMT1-203ENST00000354098 DCXRQ7Z4W1 244 aa19.19■□□□□ 0.66
SHMT1-203ENST00000354098 OR10S1Q8NGN2 331 aa19.19■□□□□ 0.66
SHMT1-203ENST00000354098 APH1BQ8WW43 257 aa19.19■□□□□ 0.66
SHMT1-203ENST00000354098 SLC7A6Q92536 515 aa19.19■□□□□ 0.66
SHMT1-203ENST00000354098 PNRC2Q9NPJ4 139 aaKnown RBP19.19■□□□□ 0.66
SHMT1-203ENST00000354098 ABCA4P78363 2273 aa19.18■□□□□ 0.66
SHMT1-203ENST00000354098 TMCC2O75069 709 aa19.18■□□□□ 0.66
SHMT1-203ENST00000354098 CCNOP22674 350 aa19.18■□□□□ 0.66
SHMT1-203ENST00000354098 GGTLC2Q14390 218 aa19.18■□□□□ 0.66
SHMT1-203ENST00000354098 ELFN2Q5R3F8 820 aa19.18■□□□□ 0.66
SHMT1-203ENST00000354098 CDC20BQ86Y33 519 aa19.18■□□□□ 0.66
SHMT1-203ENST00000354098 POM121L2Q96KW2 1035 aa19.18■□□□□ 0.66
SHMT1-203ENST00000354098 C5orf49A4QMS7 147 aa19.17■□□□□ 0.66
SHMT1-203ENST00000354098 OR6C6A6NF89 314 aa19.17■□□□□ 0.66
SHMT1-203ENST00000354098 MPZL2O60487 215 aa19.17■□□□□ 0.66
SHMT1-203ENST00000354098 PTHP01270 115 aa19.17■□□□□ 0.66
SHMT1-203ENST00000354098 APLNRP35414 380 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms